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cn_combo_scaffold_1444_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 20603..21307

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003649820 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 235.0
  • Bit_score: 381
  • Evalue 6.20e-103
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJL74548.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 234.0
  • Bit_score: 376
  • Evalue 2.10e-101
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 235.0
  • Bit_score: 344
  • Evalue 3.10e-92

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCCCGAGTCCCTGCCGAAGAAGCCGAACCCGTCTCCCTGAGCCCCACCCTCATCGTCGAGGATGACCCGGCCATGCAGGAGCGACTGCGCTACGTGCTGTCCACGCTCGGCTGCGACGAAAACAGCATCGCGGTGACCGACAGCGTCGCCGGGGCGAAGCAGCTGCTGGGCGCGAATGACTACGGCGTGGTGCTGGTCGACATCGGGCTGCCCGACGCCAGCGGCGTCGAGCTGATCGGCTGGCTGCGGGCCTGCCGCCCGGGCTTGCCGGCGGTGGTGATCTCGGCCTGGCGCACCGAGGAAGTCATCTTCGCGGCCCTGCGAGCCGGCGCCATCGGCTACCTGCTGAAGGAGCGCGACGACATCGAACTGGGCATCGCGCTGCGCAGCATCCAGCAGGGCGGCGCCCCCATCGACCCGAGCATCGCGCGCCACATCCTGGGCTGGCTCGCCACGCAGCAGGTGCCGGCCGACGCGCCGCCGGGCGCTGCCGAAGACACGACGCCGGCCGCACTGACGCGCCGCGAGCACAAGATCCTCGAGCTCGTGTCGCAAGGCCTGAGCAACCGCGACATGGCAGAGTCGCTGTCGATCTCCAGACTGACCGTGGAATGCCATACCAAGAACATCTACCGCAAGCTGGCCGTCAACTCGCGCACCGAAGCCGTGTTCCAGGCGCGGCGGCATGGCTTGCTGCGCTGA
PROTEIN sequence
Length: 235
MSRVPAEEAEPVSLSPTLIVEDDPAMQERLRYVLSTLGCDENSIAVTDSVAGAKQLLGANDYGVVLVDIGLPDASGVELIGWLRACRPGLPAVVISAWRTEEVIFAALRAGAIGYLLKERDDIELGIALRSIQQGGAPIDPSIARHILGWLATQQVPADAPPGAAEDTTPAALTRREHKILELVSQGLSNRDMAESLSISRLTVECHTKNIYRKLAVNSRTEAVFQARRHGLLR*