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cn_combo_scaffold_1444_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21394..23133

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003612135 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 577.0
  • Bit_score: 1007
  • Evalue 4.40e-291
Variovorax paradoxus strain MEDvA23 contig_53, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27711.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 577.0
  • Bit_score: 966
  • Evalue 1.60e-278
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 577.0
  • Bit_score: 954
  • Evalue 1.60e-275

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
GTGCGCGCCAGCGGCTGGAACGACACCGCCCCGCCCGCCGAAGGCTGGATGCCCGTTACCCTGCCCGACAGCTGGGCCGCGCGCTGGCCGGGCTTCGACGGCGTGGTCTGGTACAGGCTCACCTGGGAGCAGCCCGAGCAGGTGCATGAAGCCGGCCTGCTGCTGCACTACCTGAACATGGCCGGCGAGGTGTCGCTCAACGGCACGCCGATTTCGCGCGACGACAGCCTGGTGGAGCCGCTCACCCGCGCATGGAACACGCCGCGCTACTGGCTGCTGGCGCCGCCGCTGCTTCGGCCCGGCACCAACACGCTGCTGGTGCGGGTGTCGGGCCTGTTCGCCTACCAGGCCGGACTGGGGCCGGTGAGCCTTGGAGAGCCGGCCGCGATGCAGGCGGACTTCGAACGCGAGCGGCTGATCCGCCGCGACCTGCAGGTGCTGGGCCTGGCGGTGAGCGCGGCGGCCTCGGCCTTCTTCGCGGCCCTGTGGCTATTGCGCCGGCGCGAGACGGCCTACGGCTGGTTCGCGCTGATGTCGGTGCTGTGGCTGCTGTTCGGCTACAACCAGATCGCGACCAGCCCCTGGCCCTTTGCCAGCAACCACGGCTGGCAGGCGCTGAACACCTCGACGCTGCTGGTCTTCGGCTGGTGCTACGTGGTCTTCGCGCTGCGCTTCTGCGGGCGGCGCATGCCCCGGTTCGAGGGCGCCGCGCTGCTGGTCGTGGCTGCCGGCGTGCTCGACCTGTGGCTGGCGCCCGTCGCCGACCTGATCTCGCACCGCGCCGTCTGGACGCTGGTGGGCGGCCTCACCGTCATCGTGGTGAACAGCACCTCCATCGTGCACGCGCTGCGCCACCGCCACAGCCCGATGCGCTCGCTGGCGCCGTTCATGGCGGTGTCGGCGCTCACCGGTGCGCACGACCTGCTGGTGTTCACGCAGATCATCGACAGCAATACCTACTACACGACGATGTCCTCGTACGCCCTGCTGCTGGGCATGGCGCTGACGCTGGCGGCGCAGTTCGTGAAAAGCCTCAAGCGCATCGAGAACTTCAACACCGAGCTGATCGAGGAAGTGAACGCCGCCAAGGCCGACCTCGCCGCCACGCTGGCGCAGCAGCATGCGCTGGAGCTGACGCATGCGCGCATCGGCGAGCGCATGAACCTGGTGAGCGACCTGCACGACGGGCTCGGCGGCATGCTGGTGGGCAGCATCGCCAAGCTGGAGCGCACGCCCGAGGACCTCAGCGCGCCCGAGCTGCTGGCCATGCTCAAGCACCTGCGCGACGACCTGCGGCTGATCATCGACGCCACCGGCCGCGACGACGGCGCGCGCGCGCTGGGCGAGCTGCTGGCGCCGATGCGCTACCGCAGCGCGCAATTGCTGGACGCCAACGGCATCGACTGCCGCTGGAGCGTGTCGAACATCGAGACGCTCGAACTGCCCGCCTCCCAGAGCCTCGACCTGATGCGCTTCTTGCAGGAGGCGCTGACCAACGTGCTCAAGCACAGCGCCAGCCGGCGCGTGGACGTGACCGTGGCGCGCGCCGGGGCGGAGCTTCGGCTCAGCGTGCGCGACGACGGACGGGGCTTTGTCGTGGAGAACATCGACAAGGCCACCGGCGCCGGCCTGCGCAGCCTGCGCGCCCGCGCGCGGCGGCTCGGAGCGCAGCTGCAGCTGCAATCAAGGCCCGGCGAAACCCAGGTGCTGCTGCGCATGCCGCTGGGCGCGCGGCCCTGA
PROTEIN sequence
Length: 580
VRASGWNDTAPPAEGWMPVTLPDSWAARWPGFDGVVWYRLTWEQPEQVHEAGLLLHYLNMAGEVSLNGTPISRDDSLVEPLTRAWNTPRYWLLAPPLLRPGTNTLLVRVSGLFAYQAGLGPVSLGEPAAMQADFERERLIRRDLQVLGLAVSAAASAFFAALWLLRRRETAYGWFALMSVLWLLFGYNQIATSPWPFASNHGWQALNTSTLLVFGWCYVVFALRFCGRRMPRFEGAALLVVAAGVLDLWLAPVADLISHRAVWTLVGGLTVIVVNSTSIVHALRHRHSPMRSLAPFMAVSALTGAHDLLVFTQIIDSNTYYTTMSSYALLLGMALTLAAQFVKSLKRIENFNTELIEEVNAAKADLAATLAQQHALELTHARIGERMNLVSDLHDGLGGMLVGSIAKLERTPEDLSAPELLAMLKHLRDDLRLIIDATGRDDGARALGELLAPMRYRSAQLLDANGIDCRWSVSNIETLELPASQSLDLMRFLQEALTNVLKHSASRRVDVTVARAGAELRLSVRDDGRGFVVENIDKATGAGLRSLRARARRLGAQLQLQSRPGETQVLLRMPLGARP*