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cn_combo_scaffold_1444_28

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(30452..31945)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein, NodT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XFB9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 481.0
  • Bit_score: 707
  • Evalue 8.00e-201
outer membrane efflux protein, NodT family similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 481.0
  • Bit_score: 707
  • Evalue 2.30e-201
Outer membrane efflux protein, NodT family {ECO:0000313|EMBL:AGU50810.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 481.0
  • Bit_score: 707
  • Evalue 1.10e-200

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAACGCACTGCTTCCTTCTTCTTCTCTTCGTGCGCCGGGGCGCCTTTCGCTTTCGGCGCTGGCGCTGGCCGCGCTGCTCGCGGGCTGCTCGGTCGGCCCGCTCTATCACCAGCCCGTGACCGCGCTGCCGAACAACTGGAAAGAGCAGAAGGCCGCCGAAGGCTGGCTGCCCGCCGCGCCGGCCGACGCGCTGGACCGCGGCGAGTGGTGGAAGCTGTTCGGCGACCCGACGCTCGACGAACTGGCCTCGCGCGTACAGGTGTCGAACCAGAACATCGCCGCCGCAGTTGCCAACTACGCCAATGCACAGGCGCTGGTGCGCGGGCAGCGCGCGGCGCTGTTCCCGCAGGTGTCGCTCAACGGCTCCGGCAAGCGCTCGGACACCGGCAGCACCAGCCCCTCGAACGCGTTTGCCGCCACGCTGGACGCGACCTGGGCGCCCGACGTCTGGGGGCGGCTGCGCGAATCGGTGAACAGCGCCTCGGCCAATGCGCAGGCCAGCGAGGCCGACCTGGCGTCGGCGCGCCTGTCGGCCATCGGCACCATGGCGACCAACTACCTTTCGCTGCGCGAAGCCGATGTGGAAATCGGGCTGCTCGACCAGACCATCGAGGGCTACGAGCGTGCCTACACCATCACCAGCAACCGCTACAAGGCCGCCATCGCCGCGCAGTCGGACGTGCTGCAGGCGCAAAGCCAACTGGCCACGGCTCGCGCCACGCGCCTGACGCTGGTGCGCAACCGCGCCACCTTCGAGCACGCCATCGCGGTGCTGGTGGGCGCGGTGCCGGCCGATTTCAGCCTGCCGCCCGCGGCCTGGAAGCAGACGGTGCCCGGCATTCCGACCGGCGTGCCCTCGACCCTGCTGCAGCGCCGGCCCGACATCGCGGCGGCCGAGCGCTCGGTGGCCTCGGCCAATTCGCAGATCGGCATCGCGCGCTCGGCCTATTTCCCGAGCTTCAACCTGAATGCGGCGATCGGCAGCAGCGCCAGCCGGGTCGGCGACCTCTTCAGCGCGCCGAACTCGCTCTGGTCGCTGGGCCTCTCGGCGGCGCAGGTGGTGTTCGACGCGGGCGCCATCTCGGCCAGCGTCGACGCGGCCAAGGCCAGCTACGACGCCAGCGTGGCGCGCTATCGCCAGACCGTGCTCGCCGCGTTCCAGGGCGTGGAAGACCAGCTCACCGCCGGCGCCACGCTGGCGCAGCAGGAGGGCATGTACCGCGAGGCCTCCGAGGCCGCGGACAAGACCGAGCAGATCCTGCTCAATCAGTACCGCTCGGCGCTGGTGGCCTACACCGACGTGGTCACGGCCCAGGTGGCCGCGCTGAACGCGCGGCGCACGCTGGTGCAGGTGCAGCTCAACCGGCAGATCGCCGCGGTATCGCTGATCCAGGCGCTGGGCGGCGGCTGGCAGGCGGGCTGGATGGAAGGCGGCGTGCAGCCGGAGCCGGCGCAGCCCGCCACCTCACCCACGCCAACCATCAGGCCGTGA
PROTEIN sequence
Length: 498
MNALLPSSSLRAPGRLSLSALALAALLAGCSVGPLYHQPVTALPNNWKEQKAAEGWLPAAPADALDRGEWWKLFGDPTLDELASRVQVSNQNIAAAVANYANAQALVRGQRAALFPQVSLNGSGKRSDTGSTSPSNAFAATLDATWAPDVWGRLRESVNSASANAQASEADLASARLSAIGTMATNYLSLREADVEIGLLDQTIEGYERAYTITSNRYKAAIAAQSDVLQAQSQLATARATRLTLVRNRATFEHAIAVLVGAVPADFSLPPAAWKQTVPGIPTGVPSTLLQRRPDIAAAERSVASANSQIGIARSAYFPSFNLNAAIGSSASRVGDLFSAPNSLWSLGLSAAQVVFDAGAISASVDAAKASYDASVARYRQTVLAAFQGVEDQLTAGATLAQQEGMYREASEAADKTEQILLNQYRSALVAYTDVVTAQVAALNARRTLVQVQLNRQIAAVSLIQALGGGWQAGWMEGGVQPEPAQPATSPTPTIRP*