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cn_combo_scaffold_2785_4

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 3260..4126

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E6BFD similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 287.0
  • Bit_score: 469
  • Evalue 2.10e-129
LysR family transcriptional regulator {ECO:0000313|EMBL:EYS93388.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 288.0
  • Bit_score: 450
  • Evalue 2.50e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 288.0
  • Bit_score: 448
  • Evalue 1.90e-123

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Taxonomy

Cupriavidus sp. SK-4 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGTTTCACCAGTACTACAAATCGATCCGATGCTTTCATGCCGTGGCCAAGACCGGCGGCTTCACCTCGGCGGCGCAATACCTCCACATCGGCCAACCCACGGTGACGGAACAGGTCAAGGCGCTGGAGACGCGCTTCGGCGTGGAGCTCTTTCTGCGGGCCGGCCGCAGTGTCCGTCTCACCGCGGTGGGCGAACGGCTCTATGCGATCACCCAGGGGCTGTTCGGACAGGAGGAGGAAGCGATCCAGTTCCTGCAGAGCGCGCACAAGCTCAAGACCGGCGTGGTGCGGGTGGGCGCGGTGTCTCCGCCCATCGCGCTGGAACTGGCACACGGCTTCCGGCAGGCGCATCCCTCACTGGAGCTGACAGTCTCGATCGGCTCCGAAGATTCCACCCTGCGCGGGCTGCAGGACTTCGACATCGACGTGGGCATCATGGTGGAGCCGACGGCAATCGAGGGACTGCACATCGTCCCGTATCGCGACGAGCGGATCGTCGCCGTGGTGCCCGAGAACCATCCGTGGCTCACCCGCGCATCGGTCGGCACCCGCGACATCGAAGAAGAGATGGTCATCCTGCGCGAGCCCGGGTCGAAGACACGTCACCGCGTCGAACGCGCATGCCAGAAGCGGAACGTACGCCTGAACTGCGTGATGGAGATCAACAGCCGCGAGGCCATCCTTCATGCGGTCGCCAATGGCATGGGCATCGGTTTCGTCACCCAGGTCGAGTTCATTCCCCTGCCCGGCCTTGCCGCGGTCCCGATCGACGACAGCGAGCTGTCGATCAGCTACTCGCTGTGCTGCCTGGCGGTGCGCAAGGACCGGCCTTTGATCCGCGCGCTGTTCGATGTGGCGCTCGCCTGA
PROTEIN sequence
Length: 289
MFHQYYKSIRCFHAVAKTGGFTSAAQYLHIGQPTVTEQVKALETRFGVELFLRAGRSVRLTAVGERLYAITQGLFGQEEEAIQFLQSAHKLKTGVVRVGAVSPPIALELAHGFRQAHPSLELTVSIGSEDSTLRGLQDFDIDVGIMVEPTAIEGLHIVPYRDERIVAVVPENHPWLTRASVGTRDIEEEMVILREPGSKTRHRVERACQKRNVRLNCVMEINSREAILHAVANGMGIGFVTQVEFIPLPGLAAVPIDDSELSISYSLCCLAVRKDRPLIRALFDVALA*