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cn_combo_scaffold_2785_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(4198..4740)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D6380 similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 156.0
  • Bit_score: 142
  • Evalue 4.90e-31
ferric uptake regulator family protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 175.0
  • Bit_score: 97
  • Evalue 3.00e-18
Ferric uptake regulator family {ECO:0000313|EMBL:CAD84641.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 175.0
  • Bit_score: 97
  • Evalue 1.50e-17

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGCCGGCGAACGAGAGTTTTTCGGAGCAACTGCGCAGCTTGGGCATCCGGCCCACGGTCATTCGGCTGTGCGTGTTGCAGACGCTGGCGGAAAGCGATTCCGAATGGCTCGGCGGCGAGGAAGTGTTTCGCCGCATGCTCAGGCGCGGCACCGCCACCGGCCTGGCGAGCGTCTACCGCGTGATCAAGGAGCTGGAGAAAGTCAGGCTCGTGCAGCGCGAATGGGAGCGCAGCCTCGGTGGTGCGCGCGCGGTTCACCGGCTGCGGCGCAGCCAGGCGCCCGAAGGCATGGTGCGCCTGCGATGCGGGGGCTGCAACGCGAGCGTCGAGGTGGTCGACGAGGCGTTGCACGAGGGGCTGGTGCGCGCGGCGCAGGCGCATGGCATGTCGCTCGGTGGCCCGGTCACGGTGCAGCTCGCCTGCGCGCAGCCGGACTGCGCGCGTTGCGATCAGGGGTCGGCGCCGGTTGCGCACGCGGGCGACACGCTGCCGCAGCGGCCGGCCGTGGGGCATGCTGCGCCGGTCAGGCTTCTTGCGATGTAG
PROTEIN sequence
Length: 181
VPANESFSEQLRSLGIRPTVIRLCVLQTLAESDSEWLGGEEVFRRMLRRGTATGLASVYRVIKELEKVRLVQREWERSLGGARAVHRLRRSQAPEGMVRLRCGGCNASVEVVDEALHEGLVRAAQAHGMSLGGPVTVQLACAQPDCARCDQGSAPVAHAGDTLPQRPAVGHAAPVRLLAM*