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cn_combo_scaffold_2785_12

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 11932..12999

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036530B1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 351.0
  • Bit_score: 495
  • Evalue 4.50e-137
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:EJL72915.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 349.0
  • Bit_score: 451
  • Evalue 1.40e-123
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 346.0
  • Bit_score: 392
  • Evalue 1.50e-106

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCAATGAGCGCTCCGCGCGAACGGCTGATCGAGCGCGCGCTCGCGCTGATCGTCGAGGGCGAGATCGCGCCGGGCGAGGCCGCGCAGCACGCCCGCATGGCCATGAATCAATGGCGCAGCAGATCGCCCGAGCATGCGGCGGCGCTGCTGGAGGCGCGCCATCGCTGGGACGCGCTCGGTGGCATGGCCGGCGACCTGCGCGCGCACTTCGACGATCCGGCAGCCGGCATGGCCGCCGCGGCGGCGACCGAGTCCGGCCGGCGGTCGCAGCGCCGCAAGATGCTGCTCTCCATTGCGGGGCTGCTGGGCGGCGGCCTCGTCGCGGGCCGCGGCATGCAGTGGTATTGGCAACAGCCGGTTTTTCATGCGGCCTACAACACCCGCACCGCGCAGATGCTGAAGGTGTCGCTCGCGGATGGCGCCGGCGACGCGCCGGGCAGCCAGCTCGACATCGCACCGCAAAGCGCCATCGATGTCACGCTGTATCGGCAGCGCCGCGTCGTCGAGATGGCACGCGGCGAAGTGCGCTTCGAGGTGGCGCATGATGCGCGGCGCCCTTTCCAGGTCCGCACGCGCGGTGCCGTCATCGAGGTGGTCGGCACGGTCTTCACCGTGCGCGACCGTGGCGGACCCATCACCGTGGGGGTGGAACAGGGGCATGTCCGCGTGCAGGTTCGCGCCCGGCAAGACGGTGGAGCGCCCTACGCGAACGCCACGGAAGTCATCGACCTGCGCAGGGGCGAACTAATTGAAGTGCGGGACGGCCACGCCGATGCGGTGCGGCAATCAGACACCAGGGCCCTCTCGGCATGGCGCGACGGCTGGCTGGTGTTCGACAACACACCGCTGGGCGAGGCGCTGGCGGTGGTCAACAGCTACCGCGCCAGCCCGATCGTCGGCGCCAATGCGCGCATCGACGCCCTGCGCCTCTCGGGCCGCTTCCGCAGCAACGACTCGGTGGCGCTGGTGGCGCTGCTGCCGACGATCCTGCCGGTGACCGCCGTCTCCCGGCCGGATGGCAGCGTGGAACTGCAGGCCTGGCCGCATGGCGGCACCGCCTTTTGA
PROTEIN sequence
Length: 356
MAMSAPRERLIERALALIVEGEIAPGEAAQHARMAMNQWRSRSPEHAAALLEARHRWDALGGMAGDLRAHFDDPAAGMAAAAATESGRRSQRRKMLLSIAGLLGGGLVAGRGMQWYWQQPVFHAAYNTRTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDARRPFQVRTRGAVIEVVGTVFTVRDRGGPITVGVEQGHVRVQVRARQDGGAPYANATEVIDLRRGELIEVRDGHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRASPIVGANARIDALRLSGRFRSNDSVALVALLPTILPVTAVSRPDGSVELQAWPHGGTAF*