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cn_combo_scaffold_6564_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(7375..7806)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L11 n=1 Tax=Variovorax sp. CF313 RepID=J2KW88_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 143.0
  • Bit_score: 279
  • Evalue 1.60e-72
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 143.0
  • Bit_score: 279
  • Evalue 2.20e-72
rplK; 50S ribosomal protein L11 similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 143.0
  • Bit_score: 274
  • Evalue 1.40e-71

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGCGAAAAAAATCGTCGGCTTCATCAAGCTGCAAGTCCCAGCTGGTAAGGCCAACCCGTCCCCACCGATCGGTCCCGCACTCGGTCAGCGTGGTCTGAACATCATGGAGTTCTGCAAGGCGTTCAACGCGCAGACCCAAGGCGTCGAGCCGGGTCTGCCGCTGCCGGTGGTCATCACCGCGTTCGCTGACAAGAGCTTCACCTTCATCATCAAGACGCCCCCGGCGATCACCTTGATCAAGAAGGCCATCAAGCTCGAAAAGGGTTCGGCCCGCCCGCACACCGACAAGGTCGGCAAGATCACGCGCGCCCAGCTCGAAGAAATCGCCAAGGCCAAGATGAAGGACCTGACTGCCGCCGACCTCGACGCAGCAGTTCGTACCATTGCCGGCTCGGCCCGCTCGATGGGCGTGAATGTGGAGGGCGTGTAA
PROTEIN sequence
Length: 144
MAKKIVGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPLPVVITAFADKSFTFIIKTPPAITLIKKAIKLEKGSARPHTDKVGKITRAQLEEIAKAKMKDLTAADLDAAVRTIAGSARSMGVNVEGV*