ggKbase home page

cn_combo_scaffold_6564_7

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(7951..8562)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6J6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 1.30e-109
nusg antitermination factor similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 3.70e-110
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 1.90e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACCGACGACGCAGTTGAAACCACGCCGAGCACGCCGGAAGAAGAAAACACTTCCGTGCTGGCTCCCGCCGCCAACCCAGATCTGCGTTGGTACGTGGTGCATGCCTATTCGGGCATGGAGAAGGCCGTCGAGCGCAACATCACCGAGCGCATCAACCGCGCCGGCATGCAGGACAAGTTCGGCCGCATCCTGGTTCCGACCGAAGAAGTGGTCGAAATCAAGAACGGCCAGAAGCGCACCACCGAGCGTCGCTTCTTCCCGGGCTACGTGCTGGTCGAAATGATCATGGACGACGAGAGCTGGCACCTGGTGAAGCACACCAACAAGGTGACGGGCTTCGTGGGTGGTGCCAAGAACCGTCCGGCTCCGATCTCGCAAAAAGAGGTCGAAGACATCGTCAGCCAGATGCAACAGGGCACCGAGAAGCCGCGCCACAAGGTCGAATTCACCGTCGGCGAATTCGTGCGCGTCAAGGAAGGCCCGTTCACCGACTTCAACGGCACGGTCGAGGAAGTCAACTACGAGAAGAGCAAGGTCAGCGTGTCGGTCATGATTTTCGGCCGCGCCACCCCTGTGGAACTCGAATTCAGCCAGGTCGAGAAGACCTGA
PROTEIN sequence
Length: 204
MTDDAVETTPSTPEEENTSVLAPAANPDLRWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRFFPGYVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVSQMQQGTEKPRHKVEFTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQVEKT*