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cn_combo_scaffold_51_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(2528..4222)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3V3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 564.0
  • Bit_score: 836
  • Evalue 1.30e-239
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 564.0
  • Bit_score: 835
  • Evalue 1.10e-239
Histidine kinase {ECO:0000313|EMBL:ADU36977.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 564.0
  • Bit_score: 835
  • Evalue 5.30e-239

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
GTGGAAGACCGCGTACTGGTCCTGGCGCCATACGGACGGGATGCGCGGGTCATCAGCGATGTCCTGGCTGCACGGCAAATTCATGCGCACATCTGCAATGACAAGTTCGAACTGCTCCAAGCCCTGGGTCAAGGCTCGGCCGCGACGATATTGACGGAAGAGTCGCTGGTCGACGAAGTGGTGGGTGCGTTGCGCGAAATGCTCATCGCCCAGCCGCCATGGTCCGACTACCCTTTCGTGGTGCTGGCCGCCCGTCTCACGGTGCAACGCTCAGACCGGGCCCGGCAGGCGTTGCAGAGCCTGAGCAACCTGGTGCTTCTGGAGCGGCCCGCCAACGCTGACACCTTGGCCAGCGCCGCGCAATCCGCGTTGCGGGCGCGCCGTCGTCAGTATCTGACACGCGAGCACCTGGTCGAACTGGAGAATTCCAAGCGCCGTGTCGAGCAGGCCAATGACGAACTGGAAGCTCGCATCGTCGAGCGCACGGCGGACCTGGCCAGTGCCAACGACCGTTTGATGCGTGAGATCCTGGAGCGCGAGCGCGTTGAAAATTCGCTCGTCCAGAATCAAAAAATGGAAGCGCTGGGACGATTGACCGGCGGGATCGCCCATGACTTCAACAACCTGTTGCATGTCGTCAACCTGAATCTGCAACTGCTCGAACGGCTGAAAGTGAGCGAGGAACGCGTTCACGTCTACGCGCGCAGGGCCAAAGAGGCTGTCGAACGCGGATCGCGCCTGACGGCCCAGCTCCTGTCCTTCGCGCGCACGCAGAGTCTGGTCCCCAAGCTGCACGATGTGAACGAGTTGATCCGAAACATGGCGGAGCTGATCTCGATCTCCGTGGGATCGCGCATCAGGCTTTCCCTGTCCCTTTCCTCCGAGGCCGCCTTCGTCATCGTCGATGCAGCGCAAATGGAAATGGCCATACTCAACCTGTCGGTCAATGCAAGGGATGCCATGCCCCAAGGAGGCACGCTCGAGATCCGCACCCAGATCGCGGCCTGCAGGACTGCGGGCGCCTCCAGCGAGGCGGCCTACCCTCTCGGGTCCGTCATCGTGTCCATACGCGACACGGGCACGGGGATTCCGGAGAACCTGCTGGACAAGATCTTCGATCCTTTCTTCACGACCAAGCAGCATGAGGGGACCGGTCTGGGATTGAGCCAGGTCTACGGCTTTGCGCGTCAGTCCGGAGGAGACGCCGTAGCGGAAAGCGTGGTGGAGGTGGGGACGACGATCAGGCTGCGCTTTCCACTGGCACCCTCGCCGCAGGAGTCATCCGAAGTACGGCAGGAAACGGTGTCGCCAGCCTCCGCGGCGATACAAGCCGAGATCCTGGTCGTCGAGGACGACCAAGGCGTGCGCCGCAGCATGGTCGAATGCCTTCAGGTGCTCGGCTTTCGCGTCAGACAGGCGTCGGACGGGGCATCCGGCCTGATCGAACTCCAGAAGGCAAAACCGGACCTGCTTCTGGTCGACTACCTCATGCCGCACATGAATGGTGCCGAGCTGATTACCCATGCGCAGGCTATGTACAGCGACATACCTATATTGATGGCGACCGGCTACGCCGACATGAAGGCCGTCGAGCAACTGATCGGACCTCAGTCGGTACTGACCAAGCCTTTCGACCTCGACACACTCGGTGCGGCCGTTTCGCAAGAATTGAAGCGCAAGAACGCTCGAAGATAA
PROTEIN sequence
Length: 565
VEDRVLVLAPYGRDARVISDVLAARQIHAHICNDKFELLQALGQGSAATILTEESLVDEVVGALREMLIAQPPWSDYPFVVLAARLTVQRSDRARQALQSLSNLVLLERPANADTLASAAQSALRARRRQYLTREHLVELENSKRRVEQANDELEARIVERTADLASANDRLMREILERERVENSLVQNQKMEALGRLTGGIAHDFNNLLHVVNLNLQLLERLKVSEERVHVYARRAKEAVERGSRLTAQLLSFARTQSLVPKLHDVNELIRNMAELISISVGSRIRLSLSLSSEAAFVIVDAAQMEMAILNLSVNARDAMPQGGTLEIRTQIAACRTAGASSEAAYPLGSVIVSIRDTGTGIPENLLDKIFDPFFTTKQHEGTGLGLSQVYGFARQSGGDAVAESVVEVGTTIRLRFPLAPSPQESSEVRQETVSPASAAIQAEILVVEDDQGVRRSMVECLQVLGFRVRQASDGASGLIELQKAKPDLLLVDYLMPHMNGAELITHAQAMYSDIPILMATGYADMKAVEQLIGPQSVLTKPFDLDTLGAAVSQELKRKNARR*