ggKbase home page

cn_combo_scaffold_51_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(4227..5729)

Top 3 Functional Annotations

Value Algorithm Source
circadian clock protein, kaic (EC:2.7.11.1) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 2.60e-237
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ADU36978.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ADU36978.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 1.30e-236
Putative circadian clock protein, KaiC n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3V4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 9.10e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACGAATCCACTTGAACCGGTCATCCCGCGAAACGTCGAGCCCACGGGCGTACCTGGCCTGGACGACGTCACAGCAGGGGGTCTGCCGGGCGGGCATGTCTATCTGGTCGAAGGTACTCCGGGCGCTGGCAAGACGACGCTGGGACTTCAATTCCTGCTGCAAGGGCGATCGCTTGGGCAGAAGGGCCTGTATGTCACGCTCTCGGAGACTTCCGAAGAGCTTGCACAGGGGGCGGCATCACACGGCTGGGACCTGGCAGGCGTCGAGATCTTCGACCTTGTGAGCGACGACGACCTGAGCGCCGAAGCCGAGCAGAGCATCCTTCAGCCTTCCGACTTCGAGCTGGGCGAGACGATTCGAGGCGTGATGGCACTCGTGGAGCGCGAAAAGCCGTCCCGCGTGGTTTTCGACAGCCTGTCCGAACTGCGCCTTCTGTCCCAAAGCTCATTGCGATATCGCCGCCAAATCCTGGCGCTGAAGCGGTTCTTTCTCAAGCACGGTTGCACCGTGCTCCTACTGGATGACAAATCCGCCGCGTCCGGGGACATGCATCTCCACAGCATCGCGCACGGCGTGATCCAGCTCGAGCAGAACACCGGCACCTATGGGCCCGACAAGCGCCGCATGCGCGTCGTGAAGCTGCGAGGCGTGAGTTTTCGCGAAGGCGAACACGATTTCACCCTGACGCGCGGCGGCCTGCGGGTGTTTACCCGTCTGGTGGCCAACGAGCACGGCCGAACGCACGCGCAGGAACCGCTGAGTTCAGGCAACCCCGATCTCGACCGGCTCCTGGGCGGAGGCCTGACCCCGGGAACCAACTTGCTGTTCGCCGGACCTGCCGGCGTTGGCAAGACCACGACAGCCGTTTCCTGCGTGCGTGCGAGCCTGCAACTGGGGGGCAAAGCCGCAATCTTTCTCTTCGACGAAGGCACCAAGACCTTGCTGACCCGCTCGCGCGCGCTTGGCATGGGCATCGACGAGTACATCGCGAACGGACAGCTGACCCTGAATTCGGTCGACCCCGCGGAGATATCCGCGGGCCAGTTCTCGCATCACGTGCGAGATGCTGTCGAGCGTCAGGGCGTCACCACCGTGGTGATCGACACGTTGAACGCGTACCTGGTGGCAATGCCCGGCAACAACTTTCTGCTGTTGCAGATGCATGAACTGCTCACCTACCTGAACCTGCAGGGCATTACGACAATCGTCGTGCTTTCTCAACATGGCCTCACCGGCGAGACGCCGAACGACGTGGACCTGAGCTATCTGAGCGACTCGATGCTTCAGTTTCGGTATTTTGAAGCCCGCGGAGAACTTTTGAAGGCCGTCTCGGTTGTCAAGAGCCGCACCAGTGCACACGCGACGACGATCCATCAGTTTCGCCTCGGCCAAGGCGGCCTGGAGATCGGTGAGGCGCTCACTGACTTCGAAGGCGTCATGGCCGGCCTGCCTCGGTATCGGGGTCGAACACGGCTGCTCGGTGACGCCGATGAGGCTTGA
PROTEIN sequence
Length: 501
MTNPLEPVIPRNVEPTGVPGLDDVTAGGLPGGHVYLVEGTPGAGKTTLGLQFLLQGRSLGQKGLYVTLSETSEELAQGAASHGWDLAGVEIFDLVSDDDLSAEAEQSILQPSDFELGETIRGVMALVEREKPSRVVFDSLSELRLLSQSSLRYRRQILALKRFFLKHGCTVLLLDDKSAASGDMHLHSIAHGVIQLEQNTGTYGPDKRRMRVVKLRGVSFREGEHDFTLTRGGLRVFTRLVANEHGRTHAQEPLSSGNPDLDRLLGGGLTPGTNLLFAGPAGVGKTTTAVSCVRASLQLGGKAAIFLFDEGTKTLLTRSRALGMGIDEYIANGQLTLNSVDPAEISAGQFSHHVRDAVERQGVTTVVIDTLNAYLVAMPGNNFLLLQMHELLTYLNLQGITTIVVLSQHGLTGETPNDVDLSYLSDSMLQFRYFEARGELLKAVSVVKSRTSAHATTIHQFRLGQGGLEIGEALTDFEGVMAGLPRYRGRTRLLGDADEA*