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cn_combo_scaffold_51_7

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(7361..8290)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XNA8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 298.0
  • Bit_score: 356
  • Evalue 2.20e-95
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 298.0
  • Bit_score: 356
  • Evalue 6.10e-96
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53779.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 298.0
  • Bit_score: 356
  • Evalue 3.00e-95

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGATGAGCATGAAGAAACAGCCCGCCGCCGAACTCGCGCGCCTCGATCTGAACCTCGTTCGCGTGTTCGTCGCCATCTACGAAACTCGCAGCGTCACTCTGGCGGGTGACCGTCTGGACCTCACGCAGCCGACGGTCAGCCACGCCCTGGCACGGCTTCGCACGAGCTATGGCGACCGGCTCTTCTCGCGCGGCTCATCCGGGTTAGTCCCTACCGCCCTGTGCGACCAGCTGTACCCGACGCTCAAGGACTCCCTGCTGCGCATCGAGGCCACGCTGGAGGAAACCCGTGCCTTCGATGCGTCCCACTCGACGCGACGCTTCCGCATTGCCATGTCGGACATCGGGGCGCTGTATTTCACGCCCCCACTCCTGCGGCGCCTGCAGCGACTGGCGCCGCTCGTCCAGGTCGACATCACTCAGCCATCCCCCAGCCTCATCGACGACCTGAACAGCGGTGCGCTCGACCTGGCGGTGGGCAACATGCCCGAGCTGCTCACCAGCACGCGCACCCTGGCGCTTTTCGAGGAGCACTATGTGTGTCTCATGGCCAAGGACCATCCGACGATCCGCCAGCGCATGACGACCGACGAGTTCGCGCGCGCCCGCCACGTCTTCGTGACCTCGCCGGTGTCCGGGCACGCGCTGGTCGACGGCATCCTTGCGGGCCAGGGGGTGGTGCGAAACATCGTTGCCCGGATCCCGCAGTTCAGCGTGGTTCCCTACGTCGTGGCCGACACCGACCTGCTCGTCGTGATCCCCAGGCGCGTGGCGGCGCTGTTCGTTGCACACGGCGGCATGAAAGCGCTGCCGATCCCCGTGCCCTTGCCGCATTTCGAGGTGCGGATGCACTGGCACGTGCGCCATCAGGAAAATTCCGCACATCGCTGGCTGCGCGATCAGGTGGCCTCGGCGCTGCGGCCGCTTTGA
PROTEIN sequence
Length: 310
MMSMKKQPAAELARLDLNLVRVFVAIYETRSVTLAGDRLDLTQPTVSHALARLRTSYGDRLFSRGSSGLVPTALCDQLYPTLKDSLLRIEATLEETRAFDASHSTRRFRIAMSDIGALYFTPPLLRRLQRLAPLVQVDITQPSPSLIDDLNSGALDLAVGNMPELLTSTRTLALFEEHYVCLMAKDHPTIRQRMTTDEFARARHVFVTSPVSGHALVDGILAGQGVVRNIVARIPQFSVVPYVVADTDLLVVIPRRVAALFVAHGGMKALPIPVPLPHFEVRMHWHVRHQENSAHRWLRDQVASALRPL*