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cn_combo_scaffold_51_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 12108..13262

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMF8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 382.0
  • Bit_score: 594
  • Evalue 7.70e-167
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 382.0
  • Bit_score: 594
  • Evalue 2.20e-167
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU53788.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 382.0
  • Bit_score: 594
  • Evalue 1.10e-166

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGATGGAAAAACTGACCCGCCGCGCCCTCGCGGTTCTGGCAATCTGCAGCCTCGGCGCGATGAGCCCGGCGTTCGCGCAAGGCAAGCCGATCAAGATCGGTGCCGTCGTTTCGGCCACCGGGCCCGCCTCGTTCCTCGGCGATCCCCAGCAAAAGACGCTCGAGAGCTATGTTCAGAAGATCAATGCCGGTGGTGGTGTGCTGGGGCGCAAGCTGGAGCTCGTGCTCTATGACGACGCGAGCGACGCCAACAAGGCCAACGCCTTCGCGCGCCGGCTGATCATCCAGGACGAGGTCGACGCGATCCTGGGTGCATCGACCACGGGATCGACCATGGCGATGGTGCCGCAGGTCGAGGCCGCCAAGATTCCGAACATCTCGCTGGCTGCCGCCTCCGTCATCGTCGAGCCGGTCAGGCCCTGGGTCTTCAAGATGCCGCACTCGGATCGCATGGCGGCGCAGAAGGTGCTCGAGGAAATGAAGAAGCGAGGCTTCATGCAGTTCGCGCTGCTCTCCGACACCGGCGGCTTCGGCAAGTCCGGCCGCACCGAGACGCTCAAGATGGCCGGGGCCCTCGGCATGAAGGTGGTCGAGGATCAGCAGTACGGCGAGAAAGACACCGACATGACCCCGCAGCTGACGAAGGTGAAGTCTTCGCCGGCGCAGGCCATCCTGGTGTTCGGGACCGGGCAGGCCCCTGCGATCATCGCGCGCAACTACCAGCAGCTCGGTGTGCAGCAACCGCTCTACACGACTCACGGCCAAGCGTCGACCGAGTTCATCCGGATCGCCGGCAAGGCGGCCGAGGGTATTCGCATGCCCTCGCCGGCATTGCTGATCGCGAAGGCGTTGCCCGCCAGCGACCCCCAGCGCGACGTCAGCGCGGAATACGTGAAGGCGTACGAGGGCCAGTTCAAGAGCGATGTCTCGACCTTCGGCGGCTACGCACACGATGCGCTGCTGATTCTGGTGGATGCGATCAAGCGCGCCGGTGGAACCGACAAGGACAAGGTGCGCGCGGCCCTCGAGCAGACCAAGGGGTTCGTCGGGGTGAGCGGCATCTACACGATGTCCCCTCAGGATCACATGGGGCTGGACGTCACGGCCTTCCGGATGGTCGAGGTCAAGGACGGGGTCTTCAAGGAGGTCAGGTAG
PROTEIN sequence
Length: 385
MMEKLTRRALAVLAICSLGAMSPAFAQGKPIKIGAVVSATGPASFLGDPQQKTLESYVQKINAGGGVLGRKLELVLYDDASDANKANAFARRLIIQDEVDAILGASTTGSTMAMVPQVEAAKIPNISLAAASVIVEPVRPWVFKMPHSDRMAAQKVLEEMKKRGFMQFALLSDTGGFGKSGRTETLKMAGALGMKVVEDQQYGEKDTDMTPQLTKVKSSPAQAILVFGTGQAPAIIARNYQQLGVQQPLYTTHGQASTEFIRIAGKAAEGIRMPSPALLIAKALPASDPQRDVSAEYVKAYEGQFKSDVSTFGGYAHDALLILVDAIKRAGGTDKDKVRAALEQTKGFVGVSGIYTMSPQDHMGLDVTAFRMVEVKDGVFKEVR*