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cn_combo_scaffold_51_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(20829..21782)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLW1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 2.00e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 5.70e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAN90334.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 2.80e-56

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCCCCTGCCCCACTCCCTGCTGAAGATCGATCTGCACATGCTGGCCTGCCTCGAAGCTCTCATTGCCGAGAGGTCCGTGACGCGCGCGGCGGAAAGAATGGAGATCAGCCAGCCCGCGATGAGCACGGTGCTCGGGCGGCTCAGAGAGGCCCTGCGCGATCCCCTCCTCGTTCGAACGGCCCGCGGGATGGTGCCGACACCTCGGGGCGAGGAGCTCGCCGGCGTCGTGCGCTTTCACCTTCGCGGACTCACCGCCGAGTTGATGGAGAGCGAACCCTTCGACCCCACGACGGCACGGGCGAGCGTCAGTATCGCTACGACCGATTTCACGGGCGTGCTGCTTCTTCCGCGCGTGCTGGCGCGTCTTCGGCAAGAGGCACCGGGCATCCGCATTCATGTTCGTTTGCCGGACCCGAACCACATACGGGAGTGGCTGGAGGAAGGCGAATGCGACATTGCCATCGGCCTTTTCCCGGATCTGGCCGAAGGACTGAGGGTTTCGGAACTCTTCGAGGACCCGTTGAGCTGCATCGTCAGCCGGACACATCCGACGATCCGTGGAACCCTCAGCCTCGCCCAGTACATGGAGTGTTCTCACATCGTGTTCGGGTCACCGTTTGCTCCGATCTCCACCGTGGACCAGGCCATCGATCGCGCCCTGTCTGCGTTGGGTCTGGTGAGGAAAGTAAGCGTGCAGCTGGCTTCCATCCTGCTCCCGCCGCATGTCGCGGCGCAAACCGACCTGATCGCCACGACGCCAACGCGGCTTGCGAAGTACTTTTCGAACATCCTGCCCGTGCGCGTGTTCGATCCTCCCTTCGAAATTCCCGATCTTCGCTTCTCTCTGGTCTGGCACGAAAGAACGCATCGCATGGGGCCCCATCACTTCGTGCGCAGCCTCGTACGCGATATCGCGACCAGTCCCGGCGAAATCCTGCAAACCGTACCGTGA
PROTEIN sequence
Length: 318
MPLPHSLLKIDLHMLACLEALIAERSVTRAAERMEISQPAMSTVLGRLREALRDPLLVRTARGMVPTPRGEELAGVVRFHLRGLTAELMESEPFDPTTARASVSIATTDFTGVLLLPRVLARLRQEAPGIRIHVRLPDPNHIREWLEEGECDIAIGLFPDLAEGLRVSELFEDPLSCIVSRTHPTIRGTLSLAQYMECSHIVFGSPFAPISTVDQAIDRALSALGLVRKVSVQLASILLPPHVAAQTDLIATTPTRLAKYFSNILPVRVFDPPFEIPDLRFSLVWHERTHRMGPHHFVRSLVRDIATSPGEILQTVP*