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cn_combo_scaffold_51_28

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 30486..32429

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Z8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 647.0
  • Bit_score: 1035
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25750.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 626.0
  • Bit_score: 1059
  • Evalue 0.0
pas/pac sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 647.0
  • Bit_score: 1035
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGGCAGCCGGCACCCCTCCCGCCACTCCAGACGAAGCTGCCCAGGATCTCAGCCGCCCGCTGAACCTCGGCTTGGTCACCGACGCCGACTACCGTCTGATGATCGATTCGATCACGGACTACGCGATCTTCTTTCTGGACCCCAGCGGCATCGTGCTCAGTTGGAACACCGGCGCCAGACGACTCAAGGGCTATGAGGCCCACGAGGTGATCGGCGGTCCCCTGTCGATGTTCTATCCGCCCGAACTGCTCGAGAAGAACTGGCCGCAGCACGAACTCGAGGTCGCGGCGAGGGTGGGTCAGTTCCAGGACGAAGGGTGGCGGCTTCGCAAGGACGGCACGCGCTTCTGGGCCAGCGTCGTCATCACGCGCCTGATGGGGCCGGACGGCAAGCTGCGCGGCTTTTCCAAGATCACGCGCGACCTGACGGAGCGCCAGAAAAACAACGAGCTGCTCAAGGCGAGCGAAGAGCGGTTCCGCCTGATCGTCGAGGGCGTGAAAGACTATGCGATCTTCATGCTCGATCCCAGCGGCTACATCGTCAGCTGGAACGCCGGTGCCAAAGCCACCAAGGGGTATGAGGCGCACGAAATCATCGGCAAGCACTTCTCCGTGTTCTATCCCCCGGAGGTGGTGGCATCGGGCTTCCCCGAGAAGGAATTGAGAGTCGCCCTCGAAGTCGGCCGCTACGAGGACGAGGGTTGGCGCGTGCGCAAGGACGGCAGCCGGTTCTGGGCGAGCGTGGTGATCACTTCGCTGGTCGATGCGAGCGGCCGCCACCGCGGATTCGCCAAGGTCACGCGCGATCTGACCGAACGGCGGCGCATCTCCACGCTCGAGGACGAGGGGCGGCGCATCACGACCTTTCTGGCCATGCTCGGCCACGAGTTGCGTAATCCACTGACACCCATCTCCAACGCGGTGGCGATCATGGAGCGCCTGGGCCCGGGCGTCGACGCAAAGACGCTGGCGCGGATGAACAGCATCATCGCCCGGCAACTCCGGCAGATCACGCGCCTGGTCGACGACCTGCTGGATGTCGGGCGCATCACGAGCGGAAAGATCCACATCGAGTCCAAGCCCGTGAAGCTCTCCGAAGTGATCGACGAGGCGCTGGAGATGGTGAGACCGTCGGCCGACGCCAAGCATCATGCGGTGGTGCTTCGCGCGCCTGCCGAGGAGTTGTGGATCGCCGGAGACCGCGCCCGCATGATCCAGGTGGTCTGCAACCTGCTCAACAACGCCGTCAAGTTCACGCCGGATGGCGGCCGCATCGAGATCTGGCTGCGCTCGGACGGCCGCAAGGCGGAGATCGGCGTGAGCGACAACGGCCCGGGCATTGCGCCCGAGCATCTGCCTCGCATCTTCATGTTGTTCGCCCAGGGCGATCAGGAAATCTCGAGGCCGCAAGGCGGCCTGGGCCTGGGGCTGACCCTGGTGCTTCAGCTGGTGACCCTTCACGGCGGCGAAGTCAACGCCTACAGCAAGGGCATACCGGGTGCGGGCGCCGAATTCATCGTTCGCCTGCCCAGCGTCGCCGCGCCGCTGGAGAGAAGAAAGGACAAGGGCGGGGAGGCCGGCAAGATGGTCCTGGTGGTCGACGACAACCGGGATGCGGCGGAGACGATGTGCCTGCTCGTGGAAAGCCTGGGCTACCCGACCCGCACGGCCTTCGATGGTCCGTCGGCGCTGGAGGCGATCAAGGTCGAGCAGCCGGAACTGGTGCTGATGGACATCGGCTTGCCGGGATTCAGCGGCGTGGAAGTGGCCCGGCGGGTTCGCCGCGAAGTCGAGCAGCCTCCGGTTCTGATCGCAGTCACGGGGTTCGGGCAGGTGTCGGACCGGGAGCTGAGCCTGGAAGCCGGGTTCTATGCCCACCTGACCAAGCCGATCGATGTTTCGCAGCTGGAAGGCCTGCTGGAGCGGTTGCTCGGCAAAGCCTGA
PROTEIN sequence
Length: 648
MAAGTPPATPDEAAQDLSRPLNLGLVTDADYRLMIDSITDYAIFFLDPSGIVLSWNTGARRLKGYEAHEVIGGPLSMFYPPELLEKNWPQHELEVAARVGQFQDEGWRLRKDGTRFWASVVITRLMGPDGKLRGFSKITRDLTERQKNNELLKASEERFRLIVEGVKDYAIFMLDPSGYIVSWNAGAKATKGYEAHEIIGKHFSVFYPPEVVASGFPEKELRVALEVGRYEDEGWRVRKDGSRFWASVVITSLVDASGRHRGFAKVTRDLTERRRISTLEDEGRRITTFLAMLGHELRNPLTPISNAVAIMERLGPGVDAKTLARMNSIIARQLRQITRLVDDLLDVGRITSGKIHIESKPVKLSEVIDEALEMVRPSADAKHHAVVLRAPAEELWIAGDRARMIQVVCNLLNNAVKFTPDGGRIEIWLRSDGRKAEIGVSDNGPGIAPEHLPRIFMLFAQGDQEISRPQGGLGLGLTLVLQLVTLHGGEVNAYSKGIPGAGAEFIVRLPSVAAPLERRKDKGGEAGKMVLVVDDNRDAAETMCLLVESLGYPTRTAFDGPSALEAIKVEQPELVLMDIGLPGFSGVEVARRVRREVEQPPVLIAVTGFGQVSDRELSLEAGFYAHLTKPIDVSQLEGLLERLLGKA*