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cn_combo_scaffold_1118_1

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2..160

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein (Porin) n=1 Tax=Variovorax sp. CF313 RepID=J3CB80_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 3.30e-20
Outer membrane protein (Porin) {ECO:0000313|EMBL:EJL68049.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 4.60e-20
porin similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 52.0
  • Bit_score: 98
  • Evalue 6.60e-19

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 159
TACGCGACGATCGCGCGCGTGAACAACCGCAACGACGTGAACTACACCGGCAGCCTGGTCTCGGCCAGCACCACGGGCTACGGCAGCACCGGCGTGACTTACACGGGCCTGCCGCGCTCGTCGACCGGCTACGACTTCGGCATTCGCCACGCATTCTGA
PROTEIN sequence
Length: 53
YATIARVNNRNDVNYTGSLVSASTTGYGSTGVTYTGLPRSSTGYDFGIRHAF*