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cn_combo_scaffold_1118_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(3706..4389)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J2JY83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 231.0
  • Bit_score: 212
  • Evalue 3.70e-52
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJL72850.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 231.0
  • Bit_score: 212
  • Evalue 5.20e-52
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 226.0
  • Bit_score: 209
  • Evalue 1.20e-51

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCTCCGGCCGGTGCCTTTCTTCAGCGCCTTGGTCGTGGAAGCCGACCCCGCGGTCGCGCGCCGCATGCTGCGCATCCTCGGTGCGCTCGCGCCCGGCCGGCACGCGCCGTGTGTGTCCACGCCAGAGGAAGCCCATCATCTGCTGGCGGCCTTCTCGTTCGACCTGGTGTTCGTCGACATGCAGCTTCAACCGACCGGCGAAGGCGCACGGCTGATCACGCGCATACGCGTGGCGCAGCCTCGCAGCCAGGTCGTCGCGATCTCGCACATGGACAACCGGGACCTGGTGCGCTCCGCCTTCGCTGCTGGCGCGACGGGCTATCTGCTCAGCGATGCGGAAGACGCAGAGATTGCCTATGCGCTGCGCGCGCTGGAGAGCGGTGGCGTGGCGCTCGATCCGCGCGTGGGGCGCCGTGTGCTGGACATGCTGGCGGTGTCGATGCGGCGCGGCACTGTTACTGCCCCTCTCGATGCGGCGGAAGCGCCGCGCCAGCTAAGGCCGCGCGAGCTGCAGTTCCTGCGCCTGATCGCCGACGGGCTGAGCAACCGGCAGATCGCCGACGCGCTGGAGGTGTCGATCCACACCGTGGAGTTCCACGCGCGCAACGCCTACCGCAAGCTCGAGGTCAAGTCCCGGACCCAGGCCATCCTCGAGGCGACGCGCCACGGTCTTCTGGGCTGA
PROTEIN sequence
Length: 228
MLRPVPFFSALVVEADPAVARRMLRILGALAPGRHAPCVSTPEEAHHLLAAFSFDLVFVDMQLQPTGEGARLITRIRVAQPRSQVVAISHMDNRDLVRSAFAAGATGYLLSDAEDAEIAYALRALESGGVALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAPRQLRPRELQFLRLIADGLSNRQIADALEVSIHTVEFHARNAYRKLEVKSRTQAILEATRHGLLG*