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cn_combo_scaffold_1118_13

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(12255..13454)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003617171 similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 417.0
  • Bit_score: 606
  • Evalue 1.50e-170
type VI secretion-associated protein, ImpA family similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 396.0
  • Bit_score: 298
  • Evalue 3.30e-78
ImpA family type VI secretion-associated protein {ECO:0000313|EMBL:EIM98929.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 393.0
  • Bit_score: 298
  • Evalue 1.30e-77

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Taxonomy

Burkholderia terrae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGCCGCCCTGCTCTCCTCCCTGAACACCGAAGCCGCGCTGGACGGCTTCGCGCCCGACCTCGCGGCCTTTCTCGCGCCGCTGGACACGGACACCGCCGAAGGCCCCGCCGGGCCGTCGCTGCGCTACGACCCGGTGTACGGCCGCATCCGCGAGGCCCGCACCGAGGAAGACGCCAGCCTGCCCATGGGCGAGTGGACCCGCCCGCTCAAGAAGGCCGACTGGCGCGCCGCCGAGATGCTGTGCACCGAGCTGCTGCAGCGGCGCAGCAAGGACCTGCAGGTGGCCGCATGGCTCACCGAGGCATGGCTGCACCGGCACGGCATCGACGGGCTGATCGCCGGAGCCCGGCTGCTCGAAGGGCTGGTGCGGGAGTTCTGGGAAGGCGTGCATCCGCGCATCGGGGACGACGGCGATGCCGACATGCGGGCTGCGGCGTTCGTGTGGGCGAACGACACGCTGGCGCATGTGTTGCTGATGCGCGTGCCGCTGCTCGCGTGGCCCGATTTTTCTCCGCCCTTCATCAACCTGAGCGACTGGCAGCGTGCGCTGACCACCGAGTTCGGCGCCGGCGCGGGCACTGCCAAGGCGAAGGCGAAAGACGCCGTCGAAGAGCCGAGCGCGCAGACGGTGTCGCGCCAGGACATCCTCGATCACGCCGCGCGCGACCTGCACGCGATAGCCGCGCTCGACGACCGGGTGGCGCTGGCGGCCGAGGCCTGGCGCGACCTCACGGCGCTGCTCGACGAACGCATGGGCATCGATGCACCCAGCCTGTCGAAGGTGGCCGAGATGCTGGCGCGCATGCGGCAGGCGCTGCGCAGCCTGCTGCAGGAGCGCGATCCACGCGACCAGCCCAAGCCCGTGGCCATGACGCCATCGCCCGCCTACGTATTGGAAGACGACATGAGCGAAACACCTCTGACCATCTCGCCCCCTCACATCGCCGTTGTCTCCGCGCCGCTGCAGCAAGCTGCCGCCAACGGGCGCATCGGCAGCCGCGCGGAGGCCTACCAGCTGCTGGAACTGGCGGCCGAATACCTGCTGCGCGAGGAGCCGCACAGCCCCACGCCCTACCTCGTGAACCGCGCCGTGGCCTGGGGGCGCATGCCGCTGCCGCAGCTGATGCAGGAAGTGCTGCGTGAAGACGGCGACCTGAATCGGTTCTTTTCGATCATTGGCGTGAGGCTGGACGCCTGA
PROTEIN sequence
Length: 400
MAALLSSLNTEAALDGFAPDLAAFLAPLDTDTAEGPAGPSLRYDPVYGRIREARTEEDASLPMGEWTRPLKKADWRAAEMLCTELLQRRSKDLQVAAWLTEAWLHRHGIDGLIAGARLLEGLVREFWEGVHPRIGDDGDADMRAAAFVWANDTLAHVLLMRVPLLAWPDFSPPFINLSDWQRALTTEFGAGAGTAKAKAKDAVEEPSAQTVSRQDILDHAARDLHAIAALDDRVALAAEAWRDLTALLDERMGIDAPSLSKVAEMLARMRQALRSLLQERDPRDQPKPVAMTPSPAYVLEDDMSETPLTISPPHIAVVSAPLQQAAANGRIGSRAEAYQLLELAAEYLLREEPHSPTPYLVNRAVAWGRMPLPQLMQEVLREDGDLNRFFSIIGVRLDA*