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cn_combo_scaffold_1118_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(13454..17539)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375EB84 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 999.99
  • Bit_score: 2450
  • Evalue 0.0
ImcF-related, N-terminal domain containing protein {ECO:0000313|EMBL:EUC20032.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.; similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 999.99
  • Bit_score: 1440
  • Evalue 0.0
IcmF-like protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 999.99
  • Bit_score: 1421
  • Evalue 0.0

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Notes

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Taxonomy

Burkholderia sp. BT03 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4086
ATGCTGACGGACCAGCTCTTTCTCATTTCCATCGCGGTGCTGACGCTGGTGGTGCTGCTCGTGCTCGGCATGGTGCTGTACTTTGCCGCCCGTCGCTCGCATGCCAAGCCGTCGAGCGACCCGAAGGTCGCGCGCATCCGCTTCGATTCGCTGCGCAGTTCGTTCCGCCAGGCGGTGGAGCTGATCGAAGGCAACATCGCCTCGCGCGCCGACCGCTACGGCATTCCGTGGATCATGCTGCTCAACGAGGGCGACGACCACCGCCAGCTGCCCATCGAGCAGTCGGGCGTGGCCAGCGCGCTGAGCACCGAGTCGGCATCGGCCGCGGCCACGCAGGGCATCTCGTGGCACTTCTTCGACCGCGGCGTGGTCATCGACATCCAGGGCGCCTACCTCGGCTCGCCGGACGACGACGACGCTTCCGAGAAGCCCTGGGACGAGTTCCTGGGCATGTGCCGGGCCTACCGGCCGCAGCGGCCGTTCGATTCGGTGGTCATCACCATTCCGGCGGCGCTGCTGCTGGACGAAAGCACCGACGGCCGGCTCGAACTCTCCAAGCGCGCCAAGCTCGCGCACCGCCGCCTGTGGCTCGCGCAGAACCGCTTCGCCATGCGCTTCGCGGTGTACGTGCTGATCACCGGCGCCGAGCAGCTCGAAGGCTTCAGCGCCTTCGCGCGCGCGCTGCCCGAGCCGCTGCGCGCGAGCATGCTGGGCTGGTCTTCGCCTTACGACCTGTCGACCACCTACCAGCCGGGCTGGGTCGACGAAGCCGTGGGCACGGTGGTGCGTTCGGTGTCCGACGTGTCGGCCGAACTCTTCGCCACCGACACCTCGCCGCAGGGTGCCGGCCCGCAGCTGCTGCTGCCTTCGCGCATCGAGGCGCTGCGCGGCCAGCTGCAGCTGTATGTCGACGAGCTGATGCGCCCGAGCGCGTATCACGAGCCCTTCTTCTTCCGCGGCATCTACCTGACCGGCGACGCCGGCGAATCGGCGCAGGCCGTGGCCGCCATCGACGCCGAGCACGACGCCTACGGGCGGAAAGACCTCGAGCCCATCGGCGGCGACCTGATCGCGCAGCTGATGCGCCAGCCGGCGTTCCTGCGCGACCTGTTCGAGAAGAAGATCTTTCTCGAATACGGCCTCACCCGGCCGTCGCGCACCCAGACCCTGGCGCGCCCGGTGCTGCACCGCGCGCTGCGCTGGACGGCGGTGATCTTCCTGGGCGGCTGGGGCATCGGCCTGGTGGTGGCCACCTGGCAGCTGCACCGGCACAACAGCACGCTGGTGTCGGCGCTCTCGCAGCTGCAGCACGACGCGCAGTACCGCATGCGCGCGCAGCAGCGCGGCGAGGCCATACCCACCGCTTGGTACCGCAACAAGGCGCTGTCGCTGCTGGCCATGAACGAGCGGCTGCGCACCGACGGCACCTACTCGTTCTTCATGCCGGGCTCGTGGCGGCCCTTCGACGACCTGAACGAGCGCGTGATCGAGCGCATCGAGCGCGAGTTCGGCGACATCGCCGTGAGCACGCTGCGGCGCGAGCTGATGGCCCGCGTGAGCCAGTTGAGCGGCGTGGAGCAGGACGAGGCGACCGGCGAATTCATCGTCGGCGCCAGCTGCGGCCTGCCGCCGAGCTTCAGGACCATCGGCGACGCGCCGCGCAAGAACGGCCTGCTGGTCGAGGACCAGCCCGAGTTCGGCGCGCTGCAGCGCTACCTGGGTTCGGCCGAGCAGCTCGACGCCGCGCTGCAGGCGGTGGAACGCCTGCGCCAGCCTTCCACCGGCAATGCCGAAGACCTGCGCGTGGCGGTGCGCTACGCGCTGGGCGCCGAGCTGCCCGCCGACCTGAGCCGCAACCTGCGCTACTTCCGCCAGGCCGCCGAAGGCAACGCGCTGGCGATTCCGCTGGTGCCGGTGCAGGCCGCGCTGCGCTGCGCGCTCGACAAGGGCACGGCGCAGCTCGACGCGCGGCTGTTCGTGAACAACGAACTGCTGGTGTCGGAGCAGACGCTGGCGCGGCTGATGCCCTCGCTGGCCGGCAACGGCACCTTCGCGCGCACCACGGCCAGCTACCGCGAAGTGATCGGCGCCATCAAGGACCAGGAAGACCTGGTGGCTTCGGGCAAGGGCGGCTGGATGCGCCAGCCGGTGCTGGTCCTGGGCGCGTCTTATGACCGCACCATCGCGCGCATCGAACAGAACCGGCTGCTGGGGCAGGAGTCGGCCGACGCGGTGCGCGGCCGCGCGCAGGACGCCTTCCAGAAATTCCGCGCCGAGTTCAACCTGCGCTTCGGCGGCGCGCAGCCCGGCCTGGTGTGGCAGGACAAGGACGGCCGCTTCATGCTGGCGCCCGAACGCATCGCGCTGCGCGACGCGCTCACCGCGCTGCTGGCGCAGCCCTTCATGGCCGCCGCGCGCGACCGCGAGCTGCCGGGCGCCGGCCTGCGCGGTGCCTCCGCCTGGGACCTGCCGCGCCTCGACCAGGCGCTGGCGGTGGGCGACATCCGCAAGCGCTACATGAGCGAGGGCATGACGGCCTTCCCGCCGACAGTGCGCCCGGCCGTGGAAAGCGCGCTGAACGCCCACTTCGCGCAGCTGGTGATCGACCAGGTGGCCGAGGCCGCCACGGGTGGCGGCGACGGCATGCGGCCCACCTCGACCGCGCTGATGGCCACGGACACGCAGGCTGTCGCCTACGAGGCCTCGCGCCAGCGGCTCGCCAAGATCCAGGCGCTGCTGTACGAGCTGGGGGCCGGTGCGCGCGCCGAAGACCTGCGCGCGCTGGTGTCGCGCGATGCGCTGCAGCGCCTGGAGGCCGTGGACGAGGCCTTCAACCAGTCGGAGCTGTACGCCATGCGCGGACGCGACTTCCAGGGCTGGCGCGGCGAGCGCGGGCCGATGCTGGTGGCCTTCGGCGTGTCGGACACAGGTTCGCTCGCGGCCTACCTGGGCCAGCAGTTCAACCGCACCGAGACGCTGGGCAAGCTGGCCGACGGCTACATCGCCGCGCTCGACGGCGCGGGCGCGGGCTCGGTGCTCGCGCAGCGCTGGCAGGCCATCAACCGCGACCTGGAGCGCTACCGGCTGAAGAACCCGAACAGCAGCCTGCTGCTGCTCGAACAGTTCCTGGGCACCACGGGCGCCGAGATCGACCGCGAGACCTGCGCCGCCAAGCTGGCCGGCAAGGCGCCGGCGGCGCGCCTCGGCGACTACTTCGCCGACCGCCACCAGCAGATCTACAGCGCCCTGCTCGCGCGCTGCTACGAACTGCAATACGGCGACCAGCAGGAGCTGTGGACGCAGTTCTCCACGCGCTTCAACCGCTCGCTGGCGGGACGCCATCCGTTCGGCGCGGCCACCACCGCGCGCGCTTTCGACCTGGCCGACCCGGCGGACGTGAACGACCTGTCTCGCGCCTTCGATCCGCTGGCGCGCGCGCTGAAGGAAAGCCGCACCGACGGCGCCGTACGCACCGCGGCCATGCCGGGCGCGGCCGCGCGCCGCTTCGCCGACCAGTTCGGCCGTACGCGCGATTTCCTGCAGCCGCTCTTTCCCACCGACGACGGCGGCGCGCCGGGCTACGACCTGAGCGTGGACTTCCGGGTCAACACCATGGCCGAGATCGAGGGCAACAAGATCATCGACTGGTCCTTCGAGGTCGGCGACCAGGTGCTCAAGCAGCGCGACGCGCCGCGCACGCTGCGCTGGGAATACGGCATGCCGGTGGCGCTGGTGCTGCGCATCGCGAAGGACTCGCCCGTCGTCGCGCGCGCCGACCCGCAGCAGCCCGCGTTGCTGACCGACGGCCAGAGCGTGAGCTTCCGTTTTGCCGACCCGTGGGCACTCCTCACGCTGGCGCAGCGCCAGCGCGAAGGCGATTCGCTGCAGCGCCCGGACGGCCGCTCGCAACTGCTGAAGTTCGAGTTCCCGCTGGTCGCCCAGTCGGCCGGCGACACCGCCCAGACGCCGGCCGGCGGACGCGCGCGCGTGTTCCTGCGCGTCGCGGCCAGCCCCGCCGGCAAGAAGAACGCCCTGATATGGCCCGCCGCCTTCCCGGCGCGCGCGCCCGAATGGAACACGCCCTGA
PROTEIN sequence
Length: 1362
MLTDQLFLISIAVLTLVVLLVLGMVLYFAARRSHAKPSSDPKVARIRFDSLRSSFRQAVELIEGNIASRADRYGIPWIMLLNEGDDHRQLPIEQSGVASALSTESASAAATQGISWHFFDRGVVIDIQGAYLGSPDDDDASEKPWDEFLGMCRAYRPQRPFDSVVITIPAALLLDESTDGRLELSKRAKLAHRRLWLAQNRFAMRFAVYVLITGAEQLEGFSAFARALPEPLRASMLGWSSPYDLSTTYQPGWVDEAVGTVVRSVSDVSAELFATDTSPQGAGPQLLLPSRIEALRGQLQLYVDELMRPSAYHEPFFFRGIYLTGDAGESAQAVAAIDAEHDAYGRKDLEPIGGDLIAQLMRQPAFLRDLFEKKIFLEYGLTRPSRTQTLARPVLHRALRWTAVIFLGGWGIGLVVATWQLHRHNSTLVSALSQLQHDAQYRMRAQQRGEAIPTAWYRNKALSLLAMNERLRTDGTYSFFMPGSWRPFDDLNERVIERIEREFGDIAVSTLRRELMARVSQLSGVEQDEATGEFIVGASCGLPPSFRTIGDAPRKNGLLVEDQPEFGALQRYLGSAEQLDAALQAVERLRQPSTGNAEDLRVAVRYALGAELPADLSRNLRYFRQAAEGNALAIPLVPVQAALRCALDKGTAQLDARLFVNNELLVSEQTLARLMPSLAGNGTFARTTASYREVIGAIKDQEDLVASGKGGWMRQPVLVLGASYDRTIARIEQNRLLGQESADAVRGRAQDAFQKFRAEFNLRFGGAQPGLVWQDKDGRFMLAPERIALRDALTALLAQPFMAAARDRELPGAGLRGASAWDLPRLDQALAVGDIRKRYMSEGMTAFPPTVRPAVESALNAHFAQLVIDQVAEAATGGGDGMRPTSTALMATDTQAVAYEASRQRLAKIQALLYELGAGARAEDLRALVSRDALQRLEAVDEAFNQSELYAMRGRDFQGWRGERGPMLVAFGVSDTGSLAAYLGQQFNRTETLGKLADGYIAALDGAGAGSVLAQRWQAINRDLERYRLKNPNSSLLLLEQFLGTTGAEIDRETCAAKLAGKAPAARLGDYFADRHQQIYSALLARCYELQYGDQQELWTQFSTRFNRSLAGRHPFGAATTARAFDLADPADVNDLSRAFDPLARALKESRTDGAVRTAAMPGAAARRFADQFGRTRDFLQPLFPTDDGGAPGYDLSVDFRVNTMAEIEGNKIIDWSFEVGDQVLKQRDAPRTLRWEYGMPVALVLRIAKDSPVVARADPQQPALLTDGQSVSFRFADPWALLTLAQRQREGDSLQRPDGRSQLLKFEFPLVAQSAGDTAQTPAGGRARVFLRVAASPAGKKNALIWPAAFPARAPEWNTP*