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cn_combo_scaffold_1118_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(22383..23657)

Top 3 Functional Annotations

Value Algorithm Source
sodium:dicarboxylate symporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B8C9E similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 424.0
  • Bit_score: 789
  • Evalue 1.40e-225
sodium:dicarboxylate symporter similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 424.0
  • Bit_score: 611
  • Evalue 2.50e-172
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EUC20026.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 424.0
  • Bit_score: 611
  • Evalue 7.20e-172

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Taxonomy

Burkholderia sp. BT03 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAATTCCTCCAAGTTCTACGCCTTCGTCCTCAACCCCTGGGTCGTGATCATCAGCCTGGGCGCCGGCGTCGCCTTCGGCATGCTCGCGCCCGCGCTCGCAACCACGCTGGGCTTCGTGGGCGACATCTACGTCGACCTGCTGAAGATGATCACGCTGCCCTTCATGGTCTCGGCCGTGATCTTCAGCCTGCAGCGGCTGTTCCGCGACGGCGGCACCGCCAGCCTGCTGGGCCGCGTGGCGCTGGTGTTCCTCGCGTTCTCGGCCTTCGTGGCGATTGCCGGCGCGGCCACGCTGCTGATTCTTCGCCCCGGCGAGAACCTGCCCAGCACCACCATGCAGACCTTCGGCCAGATCGTGGGCGGCGACCTGAGCGCCAGCGACACGGCCATGAACCTGCGCGGCGTGGACGAAGTGAAGAAGACCGCCAGCTTCGCCGACATGCTGGTGAGCCTGGTGCCGGCCAACATCTTCTCGGCGCTGGCCAACGGCGACACGCTCAAGACGCTGGTGTTCGCGCTGCTGTTCGGCCTGGCGGTGGGGCATGTGCCCACGCGCATTTCCGACGGCCTGACGCAGGCGCTGGAGACGGTCTATCACGCCTGCCAGACGCTGATGCGCTGGCTGAGCTTTCCGCTGCCGGTGGTGCTGTTCTGCATGAGCGCGGCGCAATTGGGCAAGACGGGCATAGAGCCGTTGAGGGCGATGGGCGCCTTCGTGGTGGCCTTCCTGGTGGTGTCGGTGCTGCTGCTGGCGGTGGCGGCGGTGATCATCTGGAAGCGCTCCAACGGCACGCTGGGGCAGACGCTCAACGCGCTGCGCGGCCCCTTCGCGCTGGCGCTGGCCACGCGCAGCAGCGCCACCTGCATGCCGATCATGATCGAGAGCCTGGTCACGCGGCTGGGCTTCGCGCGCTCGCGGGTGGAGCTGCTGGTGCCGCTCACGGTCTCGCTGCTGCGCATCGGGCCGGTCGTGTATTACGTGTGCGCCACGCTCTTCATTGCGCAGATCTACGGGCGCTCGCTGTCGCCGGTGGAGATCGGCATCGTGCTCACCTCGTCGGTGCTCGCGGGCTTCGCATCGGCTGGCATGACGGGGCTGGTGACGGTGTCGCTCATCGGCATGACCTGCACCTACCTGGGCCTGCCCTTCGAGGCGGCGTTCATCCTGTTCCTGGCGGTGGACCCGGTTTGCGACATGCTGCGCACGCTGGTGCTGGTCATCGGCAACACCGCGGCCGTCGCGGTGGTGTGCCCGCGGCCCTTGAAGATCTAG
PROTEIN sequence
Length: 425
MNSSKFYAFVLNPWVVIISLGAGVAFGMLAPALATTLGFVGDIYVDLLKMITLPFMVSAVIFSLQRLFRDGGTASLLGRVALVFLAFSAFVAIAGAATLLILRPGENLPSTTMQTFGQIVGGDLSASDTAMNLRGVDEVKKTASFADMLVSLVPANIFSALANGDTLKTLVFALLFGLAVGHVPTRISDGLTQALETVYHACQTLMRWLSFPLPVVLFCMSAAQLGKTGIEPLRAMGAFVVAFLVVSVLLLAVAAVIIWKRSNGTLGQTLNALRGPFALALATRSSATCMPIMIESLVTRLGFARSRVELLVPLTVSLLRIGPVVYYVCATLFIAQIYGRSLSPVEIGIVLTSSVLAGFASAGMTGLVTVSLIGMTCTYLGLPFEAAFILFLAVDPVCDMLRTLVLVIGNTAAVAVVCPRPLKI*