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cn_combo_scaffold_1118_26

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(28043..30823)

Top 3 Functional Annotations

Value Algorithm Source
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI0003699A2B similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 916.0
  • Bit_score: 1653
  • Evalue 0.0
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:ACC75047.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 915.0
  • Bit_score: 1324
  • Evalue 0.0
type VI secretion ATPase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 915.0
  • Bit_score: 1324
  • Evalue 0.0

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Taxonomy

Burkholderia phymatum → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2781
ATGCCGGCGGCGCGCCCGGCGCCTGAGCCGCACATTCTTATGGACATCGACATCCGCACCCTGCTCGGCCGGCTCAACCCGGAATGCAAGCGCGCCATGGAACAGGCCGCCGAGCTGTGCGTGCAGCAGACGCACTACAACGTCGACCTCGAACACCTGCTGCTGAAGCTGGTGGACAACGACGCGCCCGACCTGCGGCTGGTGTTCGGCCGCTTCAGTATCCGGCCCGACACCGTGCAGTCGCAGCTGCAGAAGTCGCTGGACACCTTCAAGCGCGGCAACGGCCGCACGCCCAGCCTGGCGCCCGACTTCGCGCCGCTGTTCCAGGAAGCCTGGCTCATGAGCTCGATGCTGCTGGGCCAGCAGCACATCCGCTCCGGCACGCTGATGCTGGCGCTGCTGGACGTGGACCGCCTGCGCGGCCGGCTGGTCGACGCCGCGCCCGCGCTGCTGCAGATTCCGCGCGGCACGCTGCGCGACGAACTCGCGGGCCTGCTGCAGTCCTCGCCCGAGGACGCCGCCGCCTCGGCGCTGGCCGCCGCGCCTGTGGCTCCGGCGCCGGCCGCCAGCCAGCACAACCCGCCGAACACGCCGTCGCTGCCGGACGCCGGCGCACCGCCGCTGCAGATGCCCACCGCGCGCCGCGGCAGCTCGGCCACGCCTTCGCTCGACCAGTACACGGTCGACATGACGCAGCTCGCGCGCGACGGCGCGATCGACCCGATCCGCGGCCGCGACGGCGAGATCCGCCAGATCATCGACGTGCTGCTGCGTCGCCGCCAGAACAACCCCATCCTCACCGGCGAGGCCGGCGTCGGCAAGACGGCGGTGGTCGAAGGCTTCGCGCAGCGCGTGGTGCAGGGCGACGTGCCGCCCGCGCTGCGCCAGGTGTCGGTGCGCTCGCTCGACCTGGCGCTGCTGCAGGCCGGTGCCGGCGTGAAGGGCGAGTTCGAGAACCGGCTCAAGTCGGTCATCGCCGAGGTCAAGGCCTCGCCCACGCCGGTGATTCTTTTCATCGACGAGGCGCACCAGCTCATCGGCGCGGGCGGCGCCGAGGGCCAGGGCGACGCGGCCAACCTGCTCAAGCCGGCGCTGGCGCGCGGCGAACTGCGCACCATCGCCGCCACCACCTGGGCCGAATACAAGAAGTACGTGGAGCGCGACCCCGCGCTGGCGCGGCGCTTCCAGGTGGTGAAGGTCGAGGAGCCGAGCGAGGAAGTCGCCATCGACATGCTGCGCGGCATGGTCGAGACGCTGGAAAAGCACCACGGCGTGGAGATCATCGACGACGCGGTGCGCGAGGCCGTCAAGCTCTCGCACCGCTACATCACCGGCCGCCAGCTGCCCGACAAGGCCATCAGCGTGCTCGACACCGCCTGCGCGCGCGTGGCCATCGGGCAGAACGGGCTGCCGGCCGAGCTGGAATCGGCCGCGCGCGACATTGCCACAGGCGAAAGCGAACTGCGCGTGCTGCGCCATGAAGCAGCCACCGGCGGCGAGCACCAGGACGCCATCGCCACGCTCACCGCGAAGCTCGATGCGCTGCGCCAGAAGCACAAGCGCCTGTCGGACAAGCTCGACGAGGAGAAGCACGCGGTGATGGAGATCGTCGCGCTGCGCCGCAAGATCGCCGACAGCCTGCGCGACGACGCGCCGCCGCCCGACGAGGAGAACGACCCCGCGCTGCTCACCGCCGCGCTGCGCCGCCTCGAAAAAGGCCTGGAGGCGCTGCAGAGCGACGAGCCCATGGTGCCCGTGTGCGTCGACGGCGTGATGGTGGCCGAAGTCATCTCCGGCTGGACCGGCATCCCGGTCGGCAAGATGATGACCGACGAGCTGCACACGGTGCTCAACCTGAAGGAGAAGCTGGCCGAGCGCGTGGTCGGCCAGGACGACGCGCTGGACGCCATCGCGCGGCGCGTGCGCACCTTCCGCGCCGACCTCGACGACCCCGGCAAGCCGGTGGGCGTGTTCATGCTGGTGGGCCCCAGCGGCGTGGGCAAGACCGAGACCGCCTTCGCGCTGGCCGACCTGCTGTACGGAGGCGAGCGCAACGTCATCACCGTGAACATGTCGGAGTTCCAGGAGGCGCACACCGTCTCCAGCCTCAAGGGCGCGCCGCCCGGCTACGTGGGCTACGGGCGCGGCGGCGTGCTGACCGAGGCGGTGCGCCGCCGGCCCTACAGCGTGGTGCTGCTCGACGAGATGGAGAAGGCCCACCCCGACGTGCTGGAGCTGTTTTTCCAGGTGTTCGACAAGGGCACCATGGAAGACGGCGAAGGCGTGCAGATCGACTTCAAGAACACGCTGATCCTGCTGACCTCCAATGCGGCGCAGGACGTGATCACGCAGGCTTCGCAGGGCGGCCGCAGACCCGACCCCGAGGAGCTGGTGGAGCGCCTGCGCCCCGAGCTGCTCAAGCAGTTCAGCCCGGCTTTCCTCGGCCGGCTGGCGCTGGTGCCCTACCACCACCTGGGCGACGAGCAGATCCGCTCGATCGTGAATCTCAAGCTCGGCAAACTGGCGCGGCGCTTCGCGCTGAACCACCACGCCATCTTCACCTGGGACGAGCAGGTGGAAGACGCCATCACCGCCCGCTGCACCGAGGTGGACAGCGGCGCGCGCAACATCGACCACATCCTGGCCCACGCGGTGCTGCCCGAGCTCTCGCGCCAGGTGCTGGAGCGCATCTCGATGGCCGCCGCGTTCACCGAGGTGCACATGGGCATGGACGGCGGCGGCGCCTTCGCCTTCCGCTTCGAACCGGCAACGCTGAGCTGA
PROTEIN sequence
Length: 927
MPAARPAPEPHILMDIDIRTLLGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFSIRPDTVQSQLQKSLDTFKRGNGRTPSLAPDFAPLFQEAWLMSSMLLGQQHIRSGTLMLALLDVDRLRGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAPAASQHNPPNTPSLPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQIIDVLLRRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGVKGEFENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTIAATTWAEYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEIIDDAVREAVKLSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRHEAATGGEHQDAIATLTAKLDALRQKHKRLSDKLDEEKHAVMEIVALRRKIADSLRDDAPPPDEENDPALLTAALRRLEKGLEALQSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTDELHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTETAFALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRRPDPEELVERLRPELLKQFSPAFLGRLALVPYHHLGDEQIRSIVNLKLGKLARRFALNHHAIFTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVLERISMAAAFTEVHMGMDGGGAFAFRFEPATLS*