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cn_combo_scaffold_1118_29

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(33621..34079)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000364BF79 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 121.0
  • Bit_score: 203
  • Evalue 1.20e-49
Type VI secretion protein, lysozyme-like protein {ECO:0000313|EMBL:ELX12951.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 152.0
  • Bit_score: 100
  • Evalue 1.90e-18
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 153.0
  • Bit_score: 91
  • Evalue 3.10e-16

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Taxonomy

Janthinobacterium sp. HH01 → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGTCCGAACTTGTCAAAGGGGGCGTCGCGCCCCTGTTCGACCGGCTGGCGTCGGCGCTGTCCGAGCACGCCCATGGGGTGCATCTCGAGACGATGGAGTCCGTGCAGGACTCCATCGGCCGCGAGCTGCGCCAGCTTTTCAACACCCGTTCGCCGCTGTCGATGGCCGACTACGCGCAAGGCAGCGGCACGGTGCTGGAGTACGGCATTCCCGATTTCTCCGCGCTCAGCGCGCAGAACACCACCGACCTGCAACAGCTTGCCGCAGTGCTGCGCCAGGCTGTGCAGCGCTATGAGCCGCGCCTGTCGGAAGTGAGCGTGCAGGTCAGCGCCACGCCCAACCGGCATGAAGTCGCGCGGGTGCGCATCGGTGCGCAGGCGCGGGCCGGGCTCGCGCTGCGCCGCGTCGACTTCGAGATGCTGCTCGGCACGCCGGACAGCCTGATGAAAGTCGCCTGA
PROTEIN sequence
Length: 153
VSELVKGGVAPLFDRLASALSEHAHGVHLETMESVQDSIGRELRQLFNTRSPLSMADYAQGSGTVLEYGIPDFSALSAQNTTDLQQLAAVLRQAVQRYEPRLSEVSVQVSATPNRHEVARVRIGAQARAGLALRRVDFEMLLGTPDSLMKVA*