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cn_combo_scaffold_1635_8

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9294..9854)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036EC157 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 176.0
  • Bit_score: 302
  • Evalue 2.20e-79
XRE family transcriptional regulator {ECO:0000313|EMBL:KEC74480.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 187.0
  • Bit_score: 223
  • Evalue 3.10e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 174.0
  • Bit_score: 222
  • Evalue 8.30e-56

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGCGGCAAAAAAGCCCCGCGAACCTGATGAACCTGGGCACTGCCCTGCGACAGATGCGCCTGCTGCGCGGCATCAAGCAGACGCATTTCGCACAGCTGATGGGCGTGAACCAGGCGACGGTGTCGCGCTGGGAACGCGGGCAGCTCGCGTTGTCCACCGCACAGCAGGCCACGGCGCACCGGCTGCTCGCTGCCGCACAAGACACGACGCAGGACGCGGCCCTGAAGCGGCTGGTCGAATCGTCCACGCGCAAGGTGCACCTGATCTGCGACCGAACGCACCGCCTGCTGGCCGCGTCGCCGTCGCGCCAGGCCGAGTGGCGCGCCGATGCCGCCGAATTCATGGGGCGTTCGCTGATCGGCTACGCCTCGGAAGAAATCCTCGCGGCCGAGGCTACGCTCGACGGACTGGGCTGGCACGCAGGCGAACTGTCGTCGCTGGAGATCGCGACCGGGGCCAATGCAAATTCGGTCATTCCCATCGTGTCGGGCCGCGTGCTGTGGGAGCGCATCGCCCTGGCCGACGGGCGTGCGGGCCGCATCGTCACCACCATCGCCTGA
PROTEIN sequence
Length: 187
MRQKSPANLMNLGTALRQMRLLRGIKQTHFAQLMGVNQATVSRWERGQLALSTAQQATAHRLLAAAQDTTQDAALKRLVESSTRKVHLICDRTHRLLAASPSRQAEWRADAAEFMGRSLIGYASEEILAAEATLDGLGWHAGELSSLEIATGANANSVIPIVSGRVLWERIALADGRAGRIVTTIA*