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cn_combo_scaffold_1635_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(15586..16008)

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcriptional regulator n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036EF69C similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 140.0
  • Bit_score: 223
  • Evalue 9.90e-56
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAE48684.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 139.0
  • Bit_score: 219
  • Evalue 2.60e-54
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 140.0
  • Bit_score: 216
  • Evalue 5.80e-54

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Taxonomy

Xanthomonas arboricola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGGACGACACCGACCGCGAACTCATCTCTCTGCTGCGCGCTGATGCCCGCACGCCTGTCGTCACGCTGGCCAAGAAACTGAGACTGGCCAGGGCCACGGTACAGAATCGCATCTCCAGGCTGGAGTCCGACGGCATGATCGTCGGCTACACGTTGCGACTCAAACCCGAGGCCGAACTGCATCGGATACGCGCGTTCATGACCATCGAGGTCGATGGTCATCACGGCGACGAGGTCGGTCGGGTGCTACGTGGCAACCCGAATGTGGTCGCACTGCACACCACCAATGGGCGTTGGGACCTGATCGCCGAATTGAGGGCGGACAACCTCGAGTCGTTCGACCGGGTGCTGAACGCCATCCGCAAGATTCAAGGCATTGCCAATACGGAGACCAGCATCCTGCTCTCCACGCACAAGCTTTAG
PROTEIN sequence
Length: 141
MDDTDRELISLLRADARTPVVTLAKKLRLARATVQNRISRLESDGMIVGYTLRLKPEAELHRIRAFMTIEVDGHHGDEVGRVLRGNPNVVALHTTNGRWDLIAELRADNLESFDRVLNAIRKIQGIANTETSILLSTHKL*