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cn_combo_scaffold_2945_11

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 10415..11242

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003808F06 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 264.0
  • Bit_score: 470
  • Evalue 1.20e-129
Variovorax paradoxus strain MEDvA23 contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37194.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 264.0
  • Bit_score: 469
  • Evalue 3.70e-129
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 264.0
  • Bit_score: 467
  • Evalue 2.20e-129

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCATCAAGATCACCGCCCGCGGCGTGCGGATGGACTATGCGGCGCGCGGCGCCAGCGAGCGCGTGCGTGTGCTCGAGGGCTTCGACCTCGATGTGCGCGACGGCGAGTTCCTTTCGGTGCTCGGCCCCTCGGGCTGCGGCAAGTCGACCTTCCTGGGCATCCTGGCCGGACTCACGCAGCGCACCGGCGGCCACATCGCCATCGACGGGCGATCCGTTGCCGGCATCAACCGCAACCAGGGCGTGGTGTTCCAGGGCTACGCGCTCTTTCCGTGGCTCTCGGTGCTCGACAACATCGCGGTCGGACTGGAGATCCGCGGCCTGGGCAAGGCGGCGCGGCGGCGCACCGCTCAGGAGTACCTGGAGCTGGTGGGCCTGCACGGCTTCGGCGAGCGCTATCCGCATGAAATATCGGGCGGCATGAAGCAGCGCGTGGCTATTGCGCGCTCGCTCGCCTACGAGCCCGACGTGCTGCTGATGGACGAGCCCTTCGCCGCGCTGGACGCGCAGACACGCGAAGTGCTGCAGGGCGAACTGCTGCGCATCTGGGAACAGCACCGCAAGACCATCGTCTTCATCACGCACAGCCTGGAAGAGGCGGTGTATCTGTCGGACCGCGTGGCGGTGATGACGCAGCGGCCCGGCCGCATCAAGGACATCATCGACATTCCGCTCGCAAGGCCGCGCTCCGCGGAGCTGCGCCACACGGCGGAGTTCGCGGCGCTGCGGCATCGCGCATGGGAAGTTCTGAAAGACGAAGTGCATCTTGGGCAGCTCGGGCAGCCGCGCATCGCGGCCAAGCAGACGGCCGGAGCGCTGCCATGA
PROTEIN sequence
Length: 276
MSIKITARGVRMDYAARGASERVRVLEGFDLDVRDGEFLSVLGPSGCGKSTFLGILAGLTQRTGGHIAIDGRSVAGINRNQGVVFQGYALFPWLSVLDNIAVGLEIRGLGKAARRRTAQEYLELVGLHGFGERYPHEISGGMKQRVAIARSLAYEPDVLLMDEPFAALDAQTREVLQGELLRIWEQHRKTIVFITHSLEEAVYLSDRVAVMTQRPGRIKDIIDIPLARPRSAELRHTAEFAALRHRAWEVLKDEVHLGQLGQPRIAAKQTAGALP*