ggKbase home page

cn_combo_scaffold_2945_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 13216..14151

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW26_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 304.0
  • Bit_score: 434
  • Evalue 8.20e-119
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 304.0
  • Bit_score: 434
  • Evalue 2.30e-119
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS16724.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 304.0
  • Bit_score: 434
  • Evalue 1.20e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAACTTCCAGCAATTGCGTTCCGTGCGGGAGACCGTGCGCAGCGGCTTCAACCTGACAGAGGCCGCGCAGACGCTGCGAGCCTCCCAGTCCGGCGTGAGCCGGCAGATCCGCGACCTGGAACAAGAGCTGGGCATCGAGCTGTTCGTGCGCTCGGGCAAGCGACTCACCGGCCTCACTCCACCGGGCGACCACCTGCTGCCAATCATCGAGCGCGTGCTCGCCGAAAGCCGTCACCTGCAGCAGGCCGGCCACATCTACCTCGCGCAGCAGCAGGGCGTGTTGTCGGTGGCCGCCACGCATTCGCAGGCGCGCTACGCACTGCCGCGCGCGGTACAGGACTTCCGCCTGCGCTTTCCAGGCGTTCGGCTGCACCTGCACCAGGGCTCGCCCAAACAGGTCGCGCAGATGCTGCAGGACGGCGAGGCCGACGTGGGTATCGCCACCGAGGCGCTGGCCGACCATGCTCAGCTGCTCGCTTTGCCGTGCCGCTGTTGGCGGCATGCGGTCATCGCGCCCGTGGCGCACCCGCTGCTGCAGGAAGAAGGGCCGCTCACGCTGGCACAGCTCGCGGCCTGGCCTTTGATCACTTACGACAACGGCCTGACCGGCCGCTCGCGCATCGACGAGGCCTTCGCACGGGAAGGCCTGGCACCCGAGGTCGTGCTGGCCGCCATGGACGCAGACGTCATCAAGACCTACGTGGCGCTGGGCATGGGCGTGGGCATCGTGGCCGACCTGGCCTGCGACCCCGAGCGCGACACGCACCTGGGCGCCCTCGACGCGGGCCACCTGTTCGGCGTCAACCAGACCAAGCTGGCGGTGCGCCGCGGCGGCTACCTGCGCAGCTATGTGTATGCCTTCATCGAATGCTTCGCACCGGACCTGCCGCGCCCTGTGATCGAACTGGCCGCGGCTGCGGCGAATGACGCCTAA
PROTEIN sequence
Length: 312
MNFQQLRSVRETVRSGFNLTEAAQTLRASQSGVSRQIRDLEQELGIELFVRSGKRLTGLTPPGDHLLPIIERVLAESRHLQQAGHIYLAQQQGVLSVAATHSQARYALPRAVQDFRLRFPGVRLHLHQGSPKQVAQMLQDGEADVGIATEALADHAQLLALPCRCWRHAVIAPVAHPLLQEEGPLTLAQLAAWPLITYDNGLTGRSRIDEAFAREGLAPEVVLAAMDADVIKTYVALGMGVGIVADLACDPERDTHLGALDAGHLFGVNQTKLAVRRGGYLRSYVYAFIECFAPDLPRPVIELAAAAANDA*