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cn_combo_scaffold_2945_16

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 15515..15967

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375C672 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 150.0
  • Bit_score: 215
  • Evalue 2.90e-53
MerR family transcriptional regulator {ECO:0000313|EMBL:KJU77753.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 145.0
  • Bit_score: 209
  • Evalue 3.80e-51
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 145.0
  • Bit_score: 203
  • Evalue 4.20e-50

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGAAAATTGGAGAACTCGCAGAGCGCACCGGCTTGGCACCCTCGCGCATTCGCTTCTATGAACGCATCGGCCTGTTCAAAGCGGTCGAGCGCCAAGCCAACGGCTACCGCGCCTACCCTGATGAAGCGGTCCTGGTTCTCAGGCTCATCACGACGGGGCAGCGCGCGGGCTTCAGCCTGGACGAGTTGCGCGCGCTGCTGCCCAGCGATCTCGCGCAGTGGGAACACGGCACGCTGCTCGACACACTGCGGCGCAAGGTGCAGGACATCGAAGCGCTGCAGGCCCAGCTTGCGCAAAGCAGGATTCATCTTCTAGAACTAGTGCAGCAGATCGAAGCCAAGCCGAAGGACATGGAGTGCGCCGCCAACGCCCGGCGCGTGCTGTCGGAAATGCGGCTGGGCGACGCGGACAGCACCCCTGCGCCAGTCGCCAAGGCCCGTCGCCGCCGCTAG
PROTEIN sequence
Length: 151
MKIGELAERTGLAPSRIRFYERIGLFKAVERQANGYRAYPDEAVLVLRLITTGQRAGFSLDELRALLPSDLAQWEHGTLLDTLRRKVQDIEALQAQLAQSRIHLLELVQQIEAKPKDMECAANARRVLSEMRLGDADSTPAPVAKARRRR*