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cn_combo_scaffold_2945_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(17651..18133)

Top 3 Functional Annotations

Value Algorithm Source
elongation factor GreAB n=1 Tax=Acidovorax radicis RepID=UPI0002375BDD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 159.0
  • Bit_score: 290
  • Evalue 1.30e-75
transcription elongation factor grea/greb domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 159.0
  • Bit_score: 283
  • Evalue 2.20e-73
transcription elongation factor grea/greb domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 159.0
  • Bit_score: 278
  • Evalue 1.10e-72

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGATAAATTCTTGCTGCAACAGCAGGTACTGGAACGGCTCGCCGAAGACCTGCTGCAAGCCGAGCAGGCAGTGCGGGCAGCCCATGAAACGGCGACTCACGAAGAAAACATCGCCGAAAACAAATACGACACATTGGGGCTCGAAGCCGCCTACCTGGCCACCGGCCAAGCTCGGCGCGCCGAAGCCATACGCCAGACGATGGCCAATTGGCGCCGATTCTGCCCGCGTCCCTACGACGCCATCAAAGGCATACAGCTCGGCTCGCTGGTCTACCTGGTCGATTCCGACGACAAGCAGCAACAGCTCTTTCTCGGCCCGGAGGGGGGCAGCATGAAGTTGGTCAGCGGCTCTCAGCTTGTTCAGGTCATCAGCAGCGAAGCCCCTTTGGGTAGGGCAATGCTGGGCAAATGCGAGGGTGATGAGGTGTCGATACAGATCGCTCCAATCCGGCAGCAGTTTGAAGTGCTTCGGGTTCTTTAA
PROTEIN sequence
Length: 161
MDKFLLQQQVLERLAEDLLQAEQAVRAAHETATHEENIAENKYDTLGLEAAYLATGQARRAEAIRQTMANWRRFCPRPYDAIKGIQLGSLVYLVDSDDKQQQLFLGPEGGSMKLVSGSQLVQVISSEAPLGRAMLGKCEGDEVSIQIAPIRQQFEVLRVL*