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cn_combo_scaffold_2945_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 18454..18957

Top 3 Functional Annotations

Value Algorithm Source
DTW domain containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1X4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 167.0
  • Bit_score: 310
  • Evalue 1.30e-81
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34672.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 167.0
  • Bit_score: 320
  • Evalue 1.70e-84
dtw domain containing protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 167.0
  • Bit_score: 311
  • Evalue 1.60e-82

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGCTGCAGCACCCGCTGGAGGTACACCAAGCCAAAGGCAGTGCCCGCCTGCTGCACCTCAGCTTGGCGCACTGCCGCTTGGTGGTGGGTGAGGCATTTGCCGTGCCAGTCTGGCCGGTGGACGGCAAGCACACGCTGCTGCTGTACCCGGACAGTCTGCAAGATACCGCCCCGGACCTGCGGGTCTCACCCCAGCTACCCCCCGAGTGGCCGCAAGCCCAGTCGCGCCTGCGTCTGGTCGTGCTGGACGGCACCTGGCGCAAAAGCCGAAAGATGCTCCACCAAAGCCCGCCACTGCAACAGTTGCCCCGCTTGGCCCTGCGCAACCTGCCGCCTTCGCACTACCGTATCCGCAAAGCCCATGGGCCCGATCAACTGTCGACGCTGGAGGCGACCTGCTACGCCTTAGGCCAACTGGAAGGCGGCGCGGAGCGGTTCCAGCCCTTGTTGAATGCCTTCGACGGGTTTGTTGAGTACTTGGAGCAGGCTGGCGGGCAGCGGTAG
PROTEIN sequence
Length: 168
VLQHPLEVHQAKGSARLLHLSLAHCRLVVGEAFAVPVWPVDGKHTLLLYPDSLQDTAPDLRVSPQLPPEWPQAQSRLRLVVLDGTWRKSRKMLHQSPPLQQLPRLALRNLPPSHYRIRKAHGPDQLSTLEATCYALGQLEGGAERFQPLLNAFDGFVEYLEQAGGQR*