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cn_combo_scaffold_2201_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(14732..15931)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=4 Tax=Proteobacteria RepID=B2UA34_RALPJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 806
  • Evalue 1.00e-230
int; tyrosine-based site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 806
  • Evalue 3.80e-231
Tyrosine-based site-specific recombinase {ECO:0000313|EMBL:ABF09917.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ra similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 806
  • Evalue 1.90e-230

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Taxonomy

Cupriavidus metallidurans → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
GTGGCAAAACTCAAGCTCACCAAGTCCGCAGTCGATGCGGCACAACCCCAGGCGCAGGCCGTCGAACTCCGGGACACGCTGGTGCCCGGCTTCCTGTGCAAGGTTACACCAGCGGGCCGCAAGGTGTTCATGCTCCAGTACCGCACGAACGCTGGCGAGCGGCGCAAGCCCGCCCTGGGCCTGTACGGGGAACTGACCGTCGAGCAGGCCCGCTCGCTGGCCCAGGAATGGCTGGCCGAGGTGCGCCGGGGCGGCGACCCCAGCGCGGCCAAGGCCGCCGCCCGTTCAGCCCCCACGGTCAAGGAGCTGTGTACCAAGTTCATGGAGGATTACTCCAAGCAGCGCAACAAGCCCAGCACCCAGCGCGGGTATCAGGCCGTCATCGACCGCTGCATCGTTCCGATGCTGGGCCGTTTGAAGGTCCAGGACGTGAAGCGCCCGGACGTGGCCACGGCGATGAAGAAGATGGCGCACAAGCCGGCCGAGGCCAACCGTGCTTTCAGCGTGATGCGCAAGATGTTCAACCTGGCCGAGGTGTGGGGCCACCGGCCTGACGGCACCAACCCCTGCCGCCACGTCCCGATGTACCCCAACGGCAAGGCCACCCACCTCATCAGCGACGAGGACATGGGCAAGCTGTTTCGGCGACTGGAGCACATCGAAGCCGAGGGTCTGGAGAACTACGTCATCCCGCTGGCGATCCGCCTTCAATTCGAGTTCGCCGGCCGCCGCTCCGAAATCGTGACGCTCCGATGGGATTGGGTGGACCTGGACAACCGCCGCGTGGTCTGGCCGGACAGCAAGACGGGCGGCATGTCCAAGCCCATGAGCGAGGAAGCCTATCGACTGCTCTCGACGGCGCCACGGCAGGAAGGCACTCCCTATGTGCTGCCGTCTCCAAGCCATCCCGGCAAGCACCTGACCACGGGCGAGTATTACGGCGGCTGGAGCCGCGCCCTCAAGGCGGCGGGCGCCACGCACGTCGGCACGCATGGCATCCGCCACCGCTCCGCGACCGACATTGCCAACTCGGGCATCCCGGTCAAGGTCGGCATGGCGCTGACGGCGCACAAGACCGTGGCGATGTTCATGCGCTACGTCCACACCGAGGACGATCCGGTGCGCAAGGCGGCCGAGCTGGTGGCGAACCGGCGCAAGACGATCACCGAGGCGCAGCGGCCTGCGGAGGTGGCTGCATGA
PROTEIN sequence
Length: 400
VAKLKLTKSAVDAAQPQAQAVELRDTLVPGFLCKVTPAGRKVFMLQYRTNAGERRKPALGLYGELTVEQARSLAQEWLAEVRRGGDPSAAKAAARSAPTVKELCTKFMEDYSKQRNKPSTQRGYQAVIDRCIVPMLGRLKVQDVKRPDVATAMKKMAHKPAEANRAFSVMRKMFNLAEVWGHRPDGTNPCRHVPMYPNGKATHLISDEDMGKLFRRLEHIEAEGLENYVIPLAIRLQFEFAGRRSEIVTLRWDWVDLDNRRVVWPDSKTGGMSKPMSEEAYRLLSTAPRQEGTPYVLPSPSHPGKHLTTGEYYGGWSRALKAAGATHVGTHGIRHRSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDDPVRKAAELVANRRKTITEAQRPAEVAA*