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cn_combo_scaffold_2201_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 17209..17907

Top 3 Functional Annotations

Value Algorithm Source
Crp/Fnr family transcription regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371C654 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 215.0
  • Bit_score: 293
  • Evalue 1.70e-76
transcriptional regulator, Crp/Fnr family similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 215.0
  • Bit_score: 284
  • Evalue 2.90e-74
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGU53064.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 215.0
  • Bit_score: 284
  • Evalue 1.40e-73

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTACCTGCATCCTCTTCTAGCCAAGTTGCCTGCTGCCGAGCGCGACATGCTCGTCCAGTCCAGCGAACTGTGCTCCTATCGGCGCAATGCCCATGTTCTCGTCGCCGGGGAATGGACAGACCACATCTACTGTGTTGCCAACGGCCTGTTGCGCGTCGTGGCCCCCAGCGGCAACGATGGCATGGAGGTCACGACCGACTTCATCCGCCCGGACGATTTCTTCCTGGGCCCTTCCCTGAGCGAAGACCGCTACCAGACCAAGCAAGGCTTGATCGCCGCGCTGCCGTCGTCGGTCTACCGGGTGCCCGCCGCAGCGTTGCGCAAGCTGTGTGCAAAGCATCCCGAGGTGGCGCTGGGCTTGCTGGGGCTCGCGATGAAACGCATGTCCGGCATTCGCGGGCAGATGCGCAGCGTGTCGTCGCTGACGTCGGAAGACCTGGTGAGCCGCGTCCTGCGCCAACTGACGTATTTGGCACCTGCGGGGGCCGGTCGCTACGACAAGCGCATCACGCAGTCGGTGATCGCCTCTTACTCGGGGCTCTCGCGCGAGGTGGTCAACAAGACCATGCGTGAGCTGGAGGGCAAGGGGCTCGTTCGTCGGGACGAGGACGGGATTCATGTGTTGCCAGAGTTCAGCGAGGTTCTGGGCCAGCCTCGGGCTTTCGGCAAATCGACCGGGTGCAGCCAACGCATCTAG
PROTEIN sequence
Length: 233
MYLHPLLAKLPAAERDMLVQSSELCSYRRNAHVLVAGEWTDHIYCVANGLLRVVAPSGNDGMEVTTDFIRPDDFFLGPSLSEDRYQTKQGLIAALPSSVYRVPAAALRKLCAKHPEVALGLLGLAMKRMSGIRGQMRSVSSLTSEDLVSRVLRQLTYLAPAGAGRYDKRITQSVIASYSGLSREVVNKTMRELEGKGLVRRDEDGIHVLPEFSEVLGQPRAFGKSTGCSQRI*