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cn_combo_scaffold_3015_8

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(4334..6094)

Top 3 Functional Annotations

Value Algorithm Source
c-di-GMP phosphodiesterase A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304A8C2 similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 562.0
  • Bit_score: 477
  • Evalue 2.70e-131
putative GGDEF EAL response regulator signalling protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 565.0
  • Bit_score: 683
  • Evalue 2.10e-193
GGDEF EAL response regulator signalling protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 562.0
  • Bit_score: 471
  • Evalue 3.20e-130

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
GTGAGCACCCTGCCCTTGGCCGAAGGAACGATGGGGGCCGGGTCCAGGCAGTCCGAGATCTATCGCCTCGGCGCCAGCGGCCCCAGCCTGAACTCGGTGCTCGCCGGCGTGGACGGCATCAACCGCAAGCTCGCCCTGCTCCACATCGACGTCGATGGCATCGGCGCGATCAACGCCACGCTGGGGGAGAACATCGTCGAGCAGGCGTTGCGGGTGGTGGCCCGCCGACTGGTGCACGCAGTGCCAGACGACGCGTGGCTGTGGCGCCTGGGCAGCGAGGAGTTCGTCGCCGCCATTGCCTACCGCGAAGGCGAGAGCGACGGCGAAACCCTGGCCGAGCGGCTGCGCGAGGCCTTCGACGCGCCGGTGCAAGTGCAGCCGTTCGTGCTGGATGTGACGCTGTCGATCGGCATCGCGCTCTATCCCGACCATGCGCACGATGCCGCCGCACTGCTGGTGGCCGCCGAGCAGACCATGCGCCGGGCCAAGCGCAGCGGGCCGGGTGGACAGGCCATCCACGTGCCCGATGCCCTGCCCGACCCCGCGAACGACCCGGGCCGCGAGCACCAGGGCCATCGCTTCGTGGATGCCATCGCGCAGAGCGAGTTCCGCCTGTACTACCAGCCGGTGGTCAGCGCGCAGGACGGCAGCATCGTGGCCTGCAGTTCACTGCTGCGCTGGCACAACACCCAGGAGGGCGTGCTGCGCGCCAACCGCATCCTGCCAGCGGTGGAGCGCGCCGGCCTGGCGGGCGCGGTGGGCCTGTGGACGATCGAAACCGCGATCGGACAGGTGCAGCGCTGGCGCGGCATGGGCATCGACTACCTCAACGCGTCGGTACCACTGGAAGGCGTGCTGTTGAGCCGCGCCGAATGCCTGGACCTGATCGGCGAACTGCTGCACCGTTACGACGTGGCCGGCGCCGCGATCGAGTTCGAGGTTTCCGAATCGGTCCTGACACTGGATGCACCGCACGTAGCCGCCAACCTCGTAGGCCTGCGCGGCATGGGCGCGGTGCTGACCCTGGGCGATTTCGGCATGCGCGGGCTGAGCCTGGCCACGCTGGCGCAGTTCCCGCTGGACCGGCTCAAGATCGACCGCAGCTTCCTGCGCAATATCACCACCAACCCACGCAGCGCGGCGCTGGTACGCGGCATCATCGCGATGGGCCACCAACTGGGCATGACGCTGGTGGCGAAAGGCGTGGAAACCGATGCCGAACTCGGTTTCCTGCGCCGCAACCATTGCGACTTCTTCCAGGGTTACCTGTTCAGCCCGCCCCTGCCCGGCACCGACATCGACGAGTTGCTGCGCCAGCGCTTCCTGCTGCCGCATGTGTTTCAGGACAGCGCCGCGATGCAGCCTACCCGCACCCTGCTGCTGCTGGACGACGAGGAAAACGTGTTGCGCTCGCTGGTCCGGCTGCTGCGACGCGACGGCTACCGCCTGCTGACCGCGAGCAGCGTCAGCGAGGCGTTCGACCTGCTGGCCAGGAACGACGTGCAGGTAGTGCTTTCCGACCAGCGCATGCCGGACATGAGCGGCACCGAGTTCCTGGCCCGCGTGCGTGACCTGTATCCGGATACCGTGCGACTGGCGCTGTCCGGTTATACCGACCTTGAGACGATCAGCCAGGCGATCAACCAGGACGCGGCCTACCGCTTCCTGATCAAGCCCTGGGACGATGCCGACCTGCGCGAGCATGTGCGCGCGGCATTCCGGCTGGTGGAACAACGGCACGCCGGCCACCACCGCGACTAG
PROTEIN sequence
Length: 587
VSTLPLAEGTMGAGSRQSEIYRLGASGPSLNSVLAGVDGINRKLALLHIDVDGIGAINATLGENIVEQALRVVARRLVHAVPDDAWLWRLGSEEFVAAIAYREGESDGETLAERLREAFDAPVQVQPFVLDVTLSIGIALYPDHAHDAAALLVAAEQTMRRAKRSGPGGQAIHVPDALPDPANDPGREHQGHRFVDAIAQSEFRLYYQPVVSAQDGSIVACSSLLRWHNTQEGVLRANRILPAVERAGLAGAVGLWTIETAIGQVQRWRGMGIDYLNASVPLEGVLLSRAECLDLIGELLHRYDVAGAAIEFEVSESVLTLDAPHVAANLVGLRGMGAVLTLGDFGMRGLSLATLAQFPLDRLKIDRSFLRNITTNPRSAALVRGIIAMGHQLGMTLVAKGVETDAELGFLRRNHCDFFQGYLFSPPLPGTDIDELLRQRFLLPHVFQDSAAMQPTRTLLLLDDEENVLRSLVRLLRRDGYRLLTASSVSEAFDLLARNDVQVVLSDQRMPDMSGTEFLARVRDLYPDTVRLALSGYTDLETISQAINQDAAYRFLIKPWDDADLREHVRAAFRLVEQRHAGHHRD*