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cn_combo_scaffold_3015_15

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 11183..11914

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W03_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 110.0
  • Bit_score: 83
  • Evalue 2.80e-13
Hypothetical Protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.6
  • Coverage: 225.0
  • Bit_score: 97
  • Evalue 2.60e-17
helix-hairpin-helix DNA-binding motif-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 110.0
  • Bit_score: 83
  • Evalue 7.80e-14

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCATACAGGGCCGTATGGTTCCCGCGCAGGGCACCACGGCAAGCGGCCCCGTCTGCCCGTCGTCACCGCTGAGCAGTTCCGCGAGCTTCGGGAGTTCACCGGCAGGAGCCGGGAGGACGTGGCCGAGCTGGTCGGCGTCAGTCTGCGCACGGTGGGCCATTGGGAGACCGGGGCGGCAAGGCCCAGCTACGCGGCATATAGGCTGCTCCGCGTCATCCTGCGGGGCGACACGCTGCAACCGGGCTGGGAGGCGTACCGGTTCGTCCGGGGCAAGCTGGTGACGCCTGAGGGCCGCGCATTCGGGCCGGGTGATCTGGCGTGGCTCTCGCTGCTCGTCCAGCGGGCCAATTTCGCCAGCCTGCGGGCCGTCGCGGCCTTGCAGCATGCGGCCATGCGCAGCGGTGGCTGCTTGCTGCCTGTTGACGCGCAGGCTGGTTGCGTGGCAGCGTCGGAGGTGTCCACGGCGGGCTCTGCGGCCGTGGCGCATTCTCGCGGAACCGCCAACCGCAAACCCCCCGCTACTAACAGGGGGGTCAGTCAAGCTGAACGGACAGGCAGCGGAGTCAGTCGAGCCAAGCGCAGAGCCGTTTTCACGCAATCACGCCCCGCCGGACGCCCGCCTGCCAACGGAACGCAAGTGACGGTGCCAGGCGGAAGGACGGCGCGCGTATCTCGCGCAAAACAGCCCCGAGCGAACGCGGATCAATTCCGCGCTGGAGGTGCAGCATGA
PROTEIN sequence
Length: 244
MHTGPYGSRAGHHGKRPRLPVVTAEQFRELREFTGRSREDVAELVGVSLRTVGHWETGAARPSYAAYRLLRVILRGDTLQPGWEAYRFVRGKLVTPEGRAFGPGDLAWLSLLVQRANFASLRAVAALQHAAMRSGGCLLPVDAQAGCVAASEVSTAGSAAVAHSRGTANRKPPATNRGVSQAERTGSGVSRAKRRAVFTQSRPAGRPPANGTQVTVPGGRTARVSRAKQPRANADQFRAGGAA*