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cn_combo_scaffold_4508_14

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 11428..11715

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix type 3 domain protein n=1 Tax=mine drainage metagenome RepID=T0ZXN3_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 92.0
  • Bit_score: 139
  • Evalue 1.30e-30
XRE family transcriptional regulator Tax=RBG_16_Gallionellales_57_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 95.0
  • Bit_score: 141
  • Evalue 4.70e-31
Helix-turn-helix motif similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 92.0
  • Bit_score: 134
  • Evalue 1.20e-29

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Taxonomy

RBG_16_Gallionellales_57_15_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAGCAAGACCAAGACCGAACGATTCGCCAGCGTGTGGGATGCGTTTGCCGACACCGCCGAGGAGGCCGCCAACCTCAAGGTCCGCGCCGAACTAATGCGGAAGATCGCCTCGCTGATTCAGGAAAGCGGCTGGACGCAGGCTGCGGCCGCAGAACGCTGCGGCATCACCCAGCCACGCATGAATGACCTGCTTCGAGGCCGCATCTCGCGCTTCTCGCTTGATGCACTGGTCAACGTGGCGTCCGCCCTTGGCCAACAGGTACATATCGAGCTACAGGCAGCGTAG
PROTEIN sequence
Length: 96
MSKTKTERFASVWDAFADTAEEAANLKVRAELMRKIASLIQESGWTQAAAAERCGITQPRMNDLLRGRISRFSLDALVNVASALGQQVHIELQAA*