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cn_combo_scaffold_5052_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2889..3869

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 322.0
  • Bit_score: 524
  • Evalue 1.50e-145
23S rRNA pseudouridine synthase D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000307B200 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 325.0
  • Bit_score: 525
  • Evalue 3.70e-146
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 328.0
  • Bit_score: 520
  • Evalue 2.60e-145

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCCCCAGACCGGACCCCGCACCGCCCTCGTTCCCGACCAATGCGCAGGCCGCCGGCTGGACGCGGTGGTGGCCGAGCTGTTTCCCGAATACTCGCGCTCGCGGTTGTCGGCCTGGATCAAGTCCGGCGACCTTGTGGTGGACGGCGCCCCGGCGCGGCCGCGCGATCCGGTCCGCGGGGGCGAGGCCATTGCGCTGACCGTGGTGGAAGACGTGCAGACCCATGCGGTCGCCGAGGACATCCCGCTGGACGTGCTGTACGAGGACGAGCACGTCTTCGTGCTGGACAAGCCGGCCGGGCTGGTGGTGCATCCGGGCGCGGGCAACCCGGCCGGCACCCTGGTCAACGCGCTGCTGCACCGCGACCCCGGCCTCGACAAGCTGCCGCGCGCCGGCATCGTCCACCGCCTGGACAAGGACACCAGCGGCGTCATGGTGGTGGCCCGCACCTTGCCGGCGCACACCGCCTTGGTGGCCCAGCTGTCGGCCCGCGAGGTGCACCGGCAATACCTGGCCATCGTGGTGGGCGCGCTGGTGTCCGGCGGCACCGTGGCCGCGGCCATCGACCGCCACCCGCGCGACCGCCTGCGCATGGCGGTGCGCGAGGACGGCAAGGACGCGGTGACCCACTACCGCCTGCGCGAGCGCTTCCGCGCCCACACCGCGCTGGAATGCCGGCTGGAAACCGGCCGCACCCACCAGATCCGCGTGCACATGGCGCACCTCAAGCATCCGATCGTCGGCGATCCGCTGTACGGCGGATCGCTGAAGCTGCCGAAGGGCGCATCGGAAGAACTCATCGCCGCCCTGCGCGCCTTCAGGCGGCAGGCGCTGCATGCGGAGGTGCTGGCATTCGCGCATCCCGTCACCGGCGCGCCGGTGCGCTGCGAGGCGCCGCTGCCCGCGGACATGCAGGCGCTGATGCAGCTGCTCCGGGAAGATGCCGCCGCCCACGTCGAAGCGGAGCGTCAGCGCCGATGA
PROTEIN sequence
Length: 327
MPQTGPRTALVPDQCAGRRLDAVVAELFPEYSRSRLSAWIKSGDLVVDGAPARPRDPVRGGEAIALTVVEDVQTHAVAEDIPLDVLYEDEHVFVLDKPAGLVVHPGAGNPAGTLVNALLHRDPGLDKLPRAGIVHRLDKDTSGVMVVARTLPAHTALVAQLSAREVHRQYLAIVVGALVSGGTVAAAIDRHPRDRLRMAVREDGKDAVTHYRLRERFRAHTALECRLETGRTHQIRVHMAHLKHPIVGDPLYGGSLKLPKGASEELIAALRAFRRQALHAEVLAFAHPVTGAPVRCEAPLPADMQALMQLLREDAAAHVEAERQRR*