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cn_combo_scaffold_5052_11

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(11635..11955)

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F45D2A similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 147
  • Evalue 9.00e-33
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 144
  • Evalue 2.10e-32
TonB-dependent receptor {ECO:0000313|EMBL:ADV26433.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 144
  • Evalue 1.10e-31

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GGACGCATCGAGGAGGGCTCGCCGCGCGACAAGTTCGCGCTGACCGCCGGCTGGAACCTGCAGCGCTGGGACTTCAATGCCGGCGCGACCCGCTACGGCGAAGTGACCGCCCGCCACGCCAGCAACCCGGCGCAGGACCAGACCTACGGCGGCAAGTGGACGCTGGACCTGTCGCTGAACTTCCGCCCGAACCAGCACTGGGTGGCAACGCTGGGCGCCGACAACGCGCTGGACGAATATCCGGATCAGAACACCTACGCCAACTCCACTTTCGGCATGTTCCCGTACAGCCTGTCGCGTCGCCTACAAATGGTGAACTGA
PROTEIN sequence
Length: 107
GRIEEGSPRDKFALTAGWNLQRWDFNAGATRYGEVTARHASNPAQDQTYGGKWTLDLSLNFRPNQHWVATLGADNALDEYPDQNTYANSTFGMFPYSLSRRLQMVN*