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cn_combo_scaffold_5417_22

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(14352..15296)

Top 3 Functional Annotations

Value Algorithm Source
3-methylitaconate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E239CE similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 312.0
  • Bit_score: 503
  • Evalue 1.10e-139
AcnD-accessory protein PrpF {ECO:0000313|EMBL:EEG09058.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogul similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 314.0
  • Bit_score: 502
  • Evalue 3.50e-139
AcnD-accessory protein PrpF similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 314.0
  • Bit_score: 501
  • Evalue 1.60e-139

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Taxonomy

Pseudogulbenkiania ferrooxidans → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
CCGGATCACGACGTCGATTATCTCTACGGGCAGGTCAGCATCGACACCGCCTTCGTGGACTGGTCCGGCAACTGCGGCAACCTGTCCACCGCGGTCGGCCCGTTCGCGATCGCCAACGGCTTCCTTCCCGCCGCACGCATCCCGCAAGACGGCACGGTGACGGTGCGGATCTGGCAGGCCAACATCGGCAAGACCATCCTTGCGCACGTGCCGGTGCGCAATGGCCAGGTGCAGGAAACCGGCGATTTCGAAGTGGATGGGGTGACGTTTCCGGCCGCTGAAATCGTGCTGGAATTCCTGGATCCTTCCGACGATGACGGTGCGGGTGGATCGATGTTCCCCACCGGGAACCTGGTCGATGACCTCGAGGTGCCCGGCGTCGGCGCGCTCAAGGCCACGCTGATCACCGCCGGCATCCCCACCGTGTTCGTCAACGCCGCCGACATCGGCTACGACGGCAACGAACTGCAGCCCGCCATCAACGAAGACAAGGCCGCGCTGGCGAAGCTGGAAGCGATCCGCATTGCCGGCGCGCTGCGCATGGGCCTGATCAAGACGGCCGAAGAGGCGGCCACGCGCCAGCACACGCCGAAGGTCGCGCTGGTCGCGCCGCCCAAGGCCTACGTATCCTCCAGCGGCAAGCGCATCGAAGCCGGCGCCATCGATCTCAACGTGCGCGCGATGTCGATGGGCAAGCTGCACCACGCGATGATGGGCACCGCCTCGGTCGCCATCGCCACCGCGGCGGCAGTGCCGGGCACGCTGGTGAACATCGCCGCAGGCGGCGGCACCCGCGAACGCGTCTGCTTCGGCCACCCGTCCGGCACGCTGGCGGTAGGCGCCTCCGTCGAACAGGTCGATGGCCAGTGGGAGGTGACGCGCGCCGTGATGAGCCGCAGCGCGCGGGTGCTGATGGAAGGCTGGGTGCGGGTGCCGCAGGACTGA
PROTEIN sequence
Length: 315
PDHDVDYLYGQVSIDTAFVDWSGNCGNLSTAVGPFAIANGFLPAARIPQDGTVTVRIWQANIGKTILAHVPVRNGQVQETGDFEVDGVTFPAAEIVLEFLDPSDDDGAGGSMFPTGNLVDDLEVPGVGALKATLITAGIPTVFVNAADIGYDGNELQPAINEDKAALAKLEAIRIAGALRMGLIKTAEEAATRQHTPKVALVAPPKAYVSSSGKRIEAGAIDLNVRAMSMGKLHHAMMGTASVAIATAAAVPGTLVNIAAGGGTRERVCFGHPSGTLAVGASVEQVDGQWEVTRAVMSRSARVLMEGWVRVPQD*