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cn_combo_scaffold_11905_12

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(7869..8438)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC049F similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 184.0
  • Bit_score: 240
  • Evalue 1.10e-60
NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96206.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 184.0
  • Bit_score: 248
  • Evalue 9.30e-63
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 182.0
  • Bit_score: 230
  • Evalue 3.10e-58

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCTCGGTGGCGCACGGCCAATACCACCGCGCTGCTGCTGCTCGGCACGCTGGCCGGCACCGTCTATCCGAAGGCCAGCCTGCGCGCGCTGCCGCTGCTGTGGCTGGGCGCAGGACTGGGCGCGTGGCTGCTGGGCCAGCCCGGTTCGCATCACCTCGGCGCCAGCGGCATCACCCATGGGCTGGGTTTCCTGGTGTTCGTGCTGGGCCTGCTGCGGCGCGACCGTGCGGCGATCGCCGCCGGCATGATCGCGTTCCTGTTCTACGGCGGCATGCTGATGAGCGTGCTGCCGCGCGAAGCCGGCGTGTCGTGGGAATCGCACCTGGGCGGCGCGCTGGCCGGCATCGTCTCCGCCTTCCTGTTCCGCCGCAGCGACCCGCAGCCGGCGCGGCAGAAATACAGCTGGGAGCTGGAGGAAGAGTTCGAGGCCGAACAAGCCCGCCGCAAGGCCGAAGACGGTTTCGGCACCTTCGAGACCCGCGCGCCCGACGACGTGCCGGTGCTGTGGCAGCGCGAGACGCCGACGGAAGCACGCGGCCAGGTGTTGCCGTTCCGGCGTCGCGAGTGA
PROTEIN sequence
Length: 190
MARWRTANTTALLLLGTLAGTVYPKASLRALPLLWLGAGLGAWLLGQPGSHHLGASGITHGLGFLVFVLGLLRRDRAAIAAGMIAFLFYGGMLMSVLPREAGVSWESHLGGALAGIVSAFLFRRSDPQPARQKYSWELEEEFEAEQARRKAEDGFGTFETRAPDDVPVLWQRETPTEARGQVLPFRRRE*