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cn_combo_scaffold_3820_18

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(21798..22127)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance membrane translocase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UST7_XANC8 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 109.0
  • Bit_score: 150
  • Evalue 8.40e-34
Inner membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:KGQ19843.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 110.0
  • Bit_score: 175
  • Evalue 3.40e-41
Major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 109.0
  • Bit_score: 150
  • Evalue 3.10e-34

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
GTGCGCACGCTGGGCGGCAGTTTCGCCGCCTCGCTGACCACCTACGCCTGGAGCGAGCGCGGTGCGGTGCACCACGCGCACATGACCGAGCGGGTTTCCATGCTCGATCCCACTGCGATGGAAGCGGTGGCGCAATACGGCGGCGGCGACCTCCAGCGCGGCGCGGCGGTGCTGGAGAAGATGATTTCCAACCAGGCCGCGCAGCTCGGTTTCAACGAGATCTTCCATCTGCTGGGGATCATCTTCATCGGCGTGATCCTGTTCGTGTGGCTGGCCAAGCCGCCGTTCGGGGCCAAGACCGGCGGCGCGCCCGCTGGTGGCGGGCACTAG
PROTEIN sequence
Length: 110
VRTLGGSFAASLTTYAWSERGAVHHAHMTERVSMLDPTAMEAVAQYGGGDLQRGAAVLEKMISNQAAQLGFNEIFHLLGIIFIGVILFVWLAKPPFGAKTGGAPAGGGH*