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cn_combo_scaffold_3820_21

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(24748..25656)

Top 3 Functional Annotations

Value Algorithm Source
multidrug RND transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030C0F1A similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 301.0
  • Bit_score: 382
  • Evalue 3.60e-103
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 306.0
  • Bit_score: 380
  • Evalue 3.90e-103
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV26840.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 306.0
  • Bit_score: 380
  • Evalue 1.90e-102

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GTGGCGCGCAGCTACGTCGCGCTGGCGCAGGCGTTCGATGATCTCGACCTGGCCCGCCGCGAGCAGGCGCGCACCGGCGACCTGGTGGCGCTGGGCAAGCAGCGCATCGCCGCCGGATTGGACAACGATGCCGCCCTGCGCGGCAATGAGGCCCTGGCCGCCACCGCCACGGCACAGGCGGACGCCGCGCAGCACCGCATCGATGCGCTGCGCAACGCGCTGGCCGCGCTGCTGGGGCAAGGCCCCGATCGCGGCTTGGCGATCCAGCGCCCGCACCTGCTCGAGACTCCGGCCCCGGCGCTGCCGTCGGTGCTGCCCAGCGAACTGCTGGGGCATCGCCCGGACGTCGTCGCGGCGCGCTGGCGGGTGGAAGCGGCCGCGCAGGACATCACTTCCGCGAAGGCACGGTTCCGACCCAGCATCGACCTGAGCGGCCTGGTCGGGCTTGCCGCCACCGGCTTCAAGGGCCTGTTCGACAGCGACGCCTTCCTCGGCTTCGGCGGTCCCGCGCTGAGCCTGCCGATCTTCGACGGCGGCCAACTGCGCAGCAACCTGGCCGCGCGCGATGCCGATTACGACCTCGCCGTGGCGGAGTACAACCGGACCGTCGTCGAAGGCCTGCGCCAGGTCACCGACGCGGTGCAGGCCATACGCGCGCTGGACGCCCAGGCGGCCGCGCTGGAACAGGCCCGAAGCGCCGCCGCCGCCGCCGCGCAGGTGGTCGAGCAGCGCCAGCGCGCCGGTCTGGCCAACCGGCTCGACCTGCTGGCGGCACGCAAGCCGCTGCTGCAGGCGGAGCAACAGCTGGCGGCCGTACGCAGCCAGCGCTACGCCGCGGCCATCGACCTCGACCAGGCGCTGGGCGGCGGCATCGCCGCCACCGCGCCCACTCCCATCGCCTCCCACTGA
PROTEIN sequence
Length: 303
VARSYVALAQAFDDLDLARREQARTGDLVALGKQRIAAGLDNDAALRGNEALAATATAQADAAQHRIDALRNALAALLGQGPDRGLAIQRPHLLETPAPALPSVLPSELLGHRPDVVAARWRVEAAAQDITSAKARFRPSIDLSGLVGLAATGFKGLFDSDAFLGFGGPALSLPIFDGGQLRSNLAARDADYDLAVAEYNRTVVEGLRQVTDAVQAIRALDAQAAALEQARSAAAAAAQVVEQRQRAGLANRLDLLAARKPLLQAEQQLAAVRSQRYAAAIDLDQALGGGIAATAPTPIASH*