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cn_combo_scaffold_3478_18

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(13699..14421)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003669551 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 240.0
  • Bit_score: 395
  • Evalue 3.30e-107
RNA-binding protein S4 {ECO:0000313|EMBL:AKC87110.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthom similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 245.0
  • Bit_score: 351
  • Evalue 7.60e-94
RNA-binding S4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 240.0
  • Bit_score: 305
  • Evalue 1.30e-80

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGTCCGATTCCGTACGACTGGCCAAACGCGTGGCCGAGCTGGCCGCCTGCTCGCGCGCCGACGCGGAGCAATACATCCGCAACGGCTGGGTGCAGGTCGACGGGTGCGTGGTCGAGAATCCCGCGCACGCGGTGTCCCGCGAGACAGTGACGCTGGATGAGGAGGCGCGGCTGGAGGCCGTGGAACCGGCCACCGTGCTGCTGCACAAGCCGGTGGGCTACGACACCATCAGCGGGCCCAACCCCGCCGCCGCCCTGGTGCAGCCCGGCACCCGCTGGCCCGAAGACCCTTCCGGCGTGCGCATGCTGGAGCGCCATTTCCACCGCCTGACCCCGCTGGTGCCCCTGGATATCGACGCCAGCGGCTTGATGGTACTGACCCAGGACGGGCGGGTGTGGCGCCGCCTCACCGAGGACGGCGACGGGATCGAACAGGAATACGTGGTCGAGGTCAGCGGCGACATCGCCCCTTATGGCCTGCGCAAGCTCAACCACGGCCTGCACTACAACGGCCGCGCGCTGCCGCCGTGCAAGGTCAGCTGGCAGAACGAAGTACGCCTGCGTTTTGCCCTGAAGGGCGTGCAGGGCGGGCAGCTGCGCGACATGTGCGCGCAGGTCGGGCTGGAAGTGGTGTCGATCCGCCGCCTGCGGATCGGCAAGATCCCGCTGGCGAAGATGCCGGTGGGCACATGGCGCTACCTGCCGGTGGGCGAGCGGTTCTAG
PROTEIN sequence
Length: 241
MSDSVRLAKRVAELAACSRADAEQYIRNGWVQVDGCVVENPAHAVSRETVTLDEEARLEAVEPATVLLHKPVGYDTISGPNPAAALVQPGTRWPEDPSGVRMLERHFHRLTPLVPLDIDASGLMVLTQDGRVWRRLTEDGDGIEQEYVVEVSGDIAPYGLRKLNHGLHYNGRALPPCKVSWQNEVRLRFALKGVQGGQLRDMCAQVGLEVVSIRRLRIGKIPLAKMPVGTWRYLPVGERF*