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cn_combo_scaffold_340

Alias: RUB134_15

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Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_340_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..121)
-----------------
DNA (120bp)
protein (40aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenyla
sulfate adenylyltransferase subunit 2 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3B2EA
cysD; sulfate adenylyltransferase subunit 2
cn_combo_scaffold_340_2
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273..1049
-----------------
DNA (777bp)
protein (259aa)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZNJ2_THASP
3'(2'),5'-bisphosphate nucleotidase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ACK54155.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (str
cn_combo_scaffold_340_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1186..2451)
-----------------
DNA (1266bp)
protein (422aa)
Major facilitator transporter n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUI4_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EGJ12002.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 =
major facilitator transporter
cn_combo_scaffold_340_4
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2499..3035
-----------------
DNA (537bp)
protein (179aa)
anhydrase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A098
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:KDB51470.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus nata
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
cn_combo_scaffold_340_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2974..3999
-----------------
DNA (1026bp)
protein (342aa)
Putative redox regulated molecular chaperone heat-shock-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS02_9BURK
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-
hslO; chaperonin HslO
cn_combo_scaffold_340_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3953..4600)
-----------------
DNA (648bp)
protein (216aa)
Putative ATPase/kinase involved in NAD metabolism n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM84_9BURK
Putative ATPase/kinase involved in NAD metabolism {ECO:0000313|EMBL:EHR72518.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacteriu
hypothetical protein
cn_combo_scaffold_340_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4593..5204)
-----------------
DNA (612bp)
protein (204aa)
Putative transporter n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS04_9BURK
Putative transporter {ECO:0000313|EMBL:EGJ11122.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA
hypothetical protein
cn_combo_scaffold_340_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5223..5501)
-----------------
DNA (279bp)
protein (93aa)
Cell division protein FtsB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPA2_RUBGI
ftsB; cell division protein FtsB
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="
cn_combo_scaffold_340_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5526..6809)
-----------------
DNA (1284bp)
protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM76_9BURK
cn_combo_scaffold_340_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6832..7137)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377867
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
cn_combo_scaffold_340_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7151..8008)
-----------------
DNA (858bp)
protein (286aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS08_9BURK
cn_combo_scaffold_340_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8005..9666)
-----------------
DNA (1662bp)
protein (554aa)
pyrG; CTP synthase PyrG (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPA6_RUBGI
cn_combo_scaffold_340_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9945..10925
-----------------
DNA (981bp)
protein (327aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sour
cysK; cysteine synthase A CysK (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTH5_9BURK
cn_combo_scaffold_340_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11177..12022
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037CCA29
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72671.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
cn_combo_scaffold_340_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12070..13980)
-----------------
DNA (1911bp)
protein (637aa)
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPX2_9BURK
Signal transduction histidine kinase {ECO:0000313|EMBL:EHR72670.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;
cn_combo_scaffold_340_16
unknown

Not on your lists

comp(14018..14392)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

cn_combo_scaffold_340_17
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14691..15197)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220F7_RHOFD
hypothetical protein; K09983 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
cn_combo_scaffold_340_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15290..16096)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B41FEF
universal stress protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
UspA domain-containing protein
cn_combo_scaffold_340_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16200..17177)
-----------------
DNA (978bp)
protein (326aa)
oppF; peptide ABC transporter ATP-binding protein (EC:3.6.3.27); K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
oppF; oligopeptide ABC transporter ATP-binding protein (EC:3.6.3.27)
Peptide ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K3W6_9PROT
cn_combo_scaffold_340_20
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..18237)
-----------------
DNA (1002bp)
protein (334aa)
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24)
peptide ABC transporter ATP-binding protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036138F4
cn_combo_scaffold_340_21
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18251..19192)
-----------------
DNA (942bp)
protein (314aa)
peptide ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00036E0672
oppC; oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
oppC; oligopeptide ABC transporter permease
cn_combo_scaffold_340_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19158..20117)
-----------------
DNA (960bp)
protein (320aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBJ2_9PROT
oppB; oligopeptide ABC transporter substrate-binding protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
oppB; oligopeptide ABC transporter substrate-binding protein
cn_combo_scaffold_340_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20186..21976)
-----------------
DNA (1791bp)
protein (597aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1E7_9BRAD
appA; oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
substrate-binding protein
cn_combo_scaffold_340_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22018..23808)
-----------------
DNA (1791bp)
protein (597aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Oceanibaculum indicum P24 IPR2_9PROT">RepID=K2IPR2_9PROT
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
family 5 extracellular solute-binding protein
cn_combo_scaffold_340_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23856..24326
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFT5_AZOBR
conserved exported protein of unknown function; deacylase domain
Uncharacterized protein {ECO:0000313|EMBL:CCC99090.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
cn_combo_scaffold_340_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24326..24481
-----------------
DNA (156bp)
protein (52aa)
Succinylglutamate desuccinylase/aspartoacylase family protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_340_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24510..24854)
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP38_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_340_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24857..25333)
-----------------
DNA (477bp)
protein (159aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP39_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70820.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
cn_combo_scaffold_340_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25507..26253)
-----------------
DNA (747bp)
protein (249aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=983917 species="Bacteria; Proteob
LexA repressor n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRV1_RUBGI
cn_combo_scaffold_340_30
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26268..27296
-----------------
DNA (1029bp)
protein (343aa)
asparaginase (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
asparaginase (EC:3.5.1.1)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D853C
Displaying items 1-30 of 140 in total

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