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cn_combo_scaffold_341_2

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 457..1374

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037E7AFD similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 298.0
  • Bit_score: 415
  • Evalue 6.60e-113
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 299.0
  • Bit_score: 413
  • Evalue 7.10e-113
Transcriptional regulator {ECO:0000313|EMBL:EJL79317.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 298.0
  • Bit_score: 413
  • Evalue 2.70e-112

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCAGGATCTCAACGACATGGTGTTCTTCGCCGAAGTGGCCGAACGGGGCGGCTTTGCCGCGGCCAGCCGCGCGCTGGGCATCCCGAAGTCGCGGCTGTCGCGCCGGGTGGCCGGGCTGGAGGCCCAACTGGGTGTGCAGTTGATGCAGCGCAGCACGCGCAAGCTCTCGCTCACGCCGGCCGGCGCGCTGTTCCTGCGGCACTGCACCGCGATGCGCGACGCCGCGAAGGCCGCCGCCGAAGCCATAGCCCAGGTGCAGACCGAGCCGCGCGGCACCGTGCGCCTGAGTTGCCCGCTGACGCTGGCGCAAAGCGCCCTCGCCCCGCTGCTGCCGGTCTTCATGCAGCGCTTTGCGCAGGTGCGCGTCGAGATGCTGGTGCTGAACCGGCCGGTCGATCCGGTCGAGGAAGGCGTGGACCTCGCGCTGCGCGTGCGCAGCCAGATCGAGAACAGCGCGACGCTCGTCGCCAAGACCTTCGGCACCAGCCGCAGCATCCTGGCGGCGAGCCCGGAACTGCTGCGCCGGCAAGGGCCGGTGCGGGCGCCGGCCGATCTGTCGCGGCTCGACACGGTGGCCACGTCCACCACCGACGGCCGCAGCAGCTGGCGGCTCGAAGGGCCTGCAGGCCGGGAGATCGTGCATGCGCACGGACCACGCTACGTCGCCGACGACCTGTTGACGCTGCTGGAGGCGGTGCGCCGCGGCATCGGCGCCGCGCAACTGCCCGACTACATGTGCCGCGCCGATCTGCAGGCCGGCCGGCTGGTCGAGGTGCTGCCGGGCTGGGGGCCGCCGCCGGGCATCACGCACGTCATGTTTGCGCCGCGCCGCGCCCTGGTGCCGGCGGTGCGCGAGCTGCTCGACTTCCTCGGCGAGAACCTGAAGGGCGACACACCCGCCGAACCCGCGGGCTGA
PROTEIN sequence
Length: 306
MQDLNDMVFFAEVAERGGFAAASRALGIPKSRLSRRVAGLEAQLGVQLMQRSTRKLSLTPAGALFLRHCTAMRDAAKAAAEAIAQVQTEPRGTVRLSCPLTLAQSALAPLLPVFMQRFAQVRVEMLVLNRPVDPVEEGVDLALRVRSQIENSATLVAKTFGTSRSILAASPELLRRQGPVRAPADLSRLDTVATSTTDGRSSWRLEGPAGREIVHAHGPRYVADDLLTLLEAVRRGIGAAQLPDYMCRADLQAGRLVEVLPGWGPPPGITHVMFAPRRALVPAVRELLDFLGENLKGDTPAEPAG*