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cn_combo_scaffold_341_23

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 22406..22609

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega RpoZ (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 5.90e-28
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 2.90e-27
DNA-directed RNA polymerase subunit omega n=2 Tax=Rubrivivax RepID=I0HV69_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 2.10e-27

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCGCATCACCGTCGAAGACTGCCTGCAGAAGATCCCCAACCGCTTCCAGCTCGTGCTCGCCGCGACCTACCGGGCGCGCATGCTCAGCCAGGGCCACGCACCGAAGATCGAGACGCGCAACAAGCCCGGAGTCACCGCGCTGCGTGAGATCGCGGCCGGCCACGTCGGCCTGGAGATGCTGCGCAAGGTTCCGGTCTGA
PROTEIN sequence
Length: 68
MARITVEDCLQKIPNRFQLVLAATYRARMLSQGHAPKIETRNKPGVTALREIAAGHVGLEMLRKVPV*