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cn_combo_scaffold_1896_4

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 4004..5209

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZF4_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 409.0
  • Bit_score: 472
  • Evalue 4.60e-130
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 409.0
  • Bit_score: 472
  • Evalue 1.30e-130
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB36517.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 409.0
  • Bit_score: 472
  • Evalue 6.40e-130

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAAGCGCTCGACCCTGATCCCCACGGTCCTCGCGGCGGCGGCACTCGTGGCCCTGGTGGCCTGGGCGCTGGCGCCGCGTCCGGTCGAGGTCGAGGTCGCCACGGCCGTGCGCGGCCCGTTCGAGCTCACCGTCGACGAGGATGCGCGCACGCGCCTGGCCGCACGCTACGGCGTCTCGTCGCCGCTGGCGGCGCGGCTGGCGCGCATCACGCTGCGCGAGGGCGACGAGGTTCGCGCCGGCGACGTGCTGGCCCGGCTGCAGCCGCTGCCTGCGCCCTTGCTGGACGAGCGCAGCCGGCGCGAGCAGGCCGCGCGCGTGGCCGCCAGCGAAGCCGGCGTGCGGCAGGCGCACGAGCGCATGGAGGCCGCGCGCGTGGCCCTGGCGCGCACGCGCGACGAGCAGCAGCGCAGCGAGCTGCTGGCGGGCCAGGGTTTCGTCTCGCCGACGCGGCTGACGGCCGAGCGCCTGGCGGTGCAGGCGGCGCAGAAGGAGCTGGATGCGGCGGAGGCGGGCGAGCAGGTGGCGCGCCACGAGCTGCAGCTGGCGCGCGTGGCGCTGGACTTCACGCGCGGCAACGGCGGCGGTGCCGAGGTCGAACTGCGCGCGCCGGTGGCCGGCCGCGTGCTCGCGCTGCACCAGACGAGCGCCGGCACGGTGGCGCCGGGCGCGCCGCTGCTGGACATCGGCGACACGGCGCAGCTGGAGGTGGTGGCCGAACTGCTGACCGCGGACGCGCTGCAGGCCCGGCCGGGCAGCGCGGTGCGCATCGAGCGCTGGGGCGGCCCGGTCGAGCTGCAGGGGCGCGTGCGCCGGGTCGAGCCGGCGGCCTTCACCAAGGTGTCGGCGCTGGGCGTGGAGGAGCAGCGCGTCAAGGTGCTGATCGACATCACCAGCCCGCGCGAGCAGTGGGCCCTGCTCGGCGACGGCTACCGTGTCGGCGTACGCATCGTCACCCGGGCCGAAGCGCGCGTGCTCAAGGTGCCGGTGGGTGCGGTGTTCCCGCTGCCCGCGCCGCAGCAGGGCCATGGCGTCTTCGTCGTCGACGGCCGTCGGGCGCGGCTGCAGCCGGTGACGCTGAAGGCGCGCAACGGCGCCGAGGCCTGGCTGGCCGAGGACCCCCGGCGCGGCGTGGCCGAGGGCTTGCGGGTCATCGTCTACCCGGCCGCCGCTGTCGGCGACGGCGTCGTCGTGCGCGCGCGCTGA
PROTEIN sequence
Length: 402
MKRSTLIPTVLAAAALVALVAWALAPRPVEVEVATAVRGPFELTVDEDARTRLAARYGVSSPLAARLARITLREGDEVRAGDVLARLQPLPAPLLDERSRREQAARVAASEAGVRQAHERMEAARVALARTRDEQQRSELLAGQGFVSPTRLTAERLAVQAAQKELDAAEAGEQVARHELQLARVALDFTRGNGGGAEVELRAPVAGRVLALHQTSAGTVAPGAPLLDIGDTAQLEVVAELLTADALQARPGSAVRIERWGGPVELQGRVRRVEPAAFTKVSALGVEEQRVKVLIDITSPREQWALLGDGYRVGVRIVTRAEARVLKVPVGAVFPLPAPQQGHGVFVVDGRRARLQPVTLKARNGAEAWLAEDPRRGVAEGLRVIVYPAAAVGDGVVVRAR*