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cn_combo_scaffold_1896_20

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(22066..24615)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRQ1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 855.0
  • Bit_score: 996
  • Evalue 1.50e-287
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EHR72831.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 855.0
  • Bit_score: 996
  • Evalue 2.10e-287
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 860.0
  • Bit_score: 970
  • Evalue 3.20e-280

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Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2550
ATGTCGGACATGTCGGTCCCCCCGTTGACGCTCGCCTCGATGGAGCCGCCCCCCGCGCGCGCGTCCGCCGCGGCGGCGCCAGGCGCCGCAGCAGCGCCCGCGCGCTTTGCCTGGCCAACGCCCTCGCTGCCCTGCTACCCGGCACCCACGCCGCCGCTGGCGCCCGAAGCCTGCGTCATCGAGGGCACGAACGGCAGCACGATGGCCGGTCGCCTGATGCACTTCAGCCTCGAAGCCGGCATGGCGCACGTGCAGGTGGCGGCCTCGCGCACGACCATGCCGCTGCGCTTCTCGCAGTTCCGCGTGCTGCGCCTGGCCAAGCCGCTGAACCCGCTGCCCTTCGACCCCACCGACACCACGCCGCTGGCGCTGACGGAATGCAAGGCCCAGCCCTACCGCCTGACGCTGCAGGACGGCACGCAGCTGGAAGGCCACACGATCACGCACGAGGAAAACGCGCACGGCCTCTTCCTCTTCGAGCCGGCCAACGAGGACGGCGCGGTGCGCCGCTGCTTCGTGCCGCGCATGGCCTACCGCCACGTCGACATCGGCCTGCGCCTGGGCGAGGCGCTGATCGAGCAGCAGGCCGCCACCGCCGCGCAGGTCAGCGCCGCACTCTGCGAGCAGGACCGGCTGCGCCAGCAGAAGCTCGGCGAGATCCTGCTCGTGCGCCAGCTCATCACGCCGCAGGACCTGGAGACGGCGATCGAGGAGCAGGCGCGCATGCCGATGGTGCGCATCGGCCAGGCGCTGATCGCGCTCGAGATGATCACCGAGGCGCAGCTCGAGCAGGCGCTGCAGCAGCAGCAGGTCGACCGCGGCGTGCCGCTGGGCGAGCTGCTGGTGAAAAGCGGCGTCATCAAGCCGCAGGACCTGCAGACGGCGCTGGCGCGCAAGATGGGCTATCCGATGGTCGACCCGGAGCAGTTCCCGGTCGAGATCGAGGCGCTGCAGAAGCTGCCCTACGGCCTGGCTTCGCGCCTGGTCGCGCTGCCGCTGATGCTGCGCGGCGGGCGCCTCGTCGTCGCGCTCGAGGACCCGACCCGGCGCAAGCTGCTGGACGAGCTCGAGTTCGCCAGCGGCTGCAAGGCGATTCCGGTGCTGGCGCGCGCCAACACGCTGTTCTCGGCCATCGAGCGCAACTACGAGAGGATCGGCGCGGAGACCCGCGCCAGCGCGACCAACGAGGTCGGCGCCCTCGATTTCCAGCCCGAGGAGGCCGGCAAGCTGCTGGCCACGCTCGAGCAGGAACACAGCGCCGCCGACGCGCCCGACGCGGGCGAGGACAATCCGATCGAGCAGAGCGACAACTCGCTCGTGCGGCTGATCAACAGCATGATCCTGGACGCCCAGGCGCAGGGCGTCTCCGACATCCACATCGAATGCGCGCCCGGACGCGAGAAGGTCAAGGTGCGCTTTCGCAAGGACGGCGCAATGCGGCCCTACCTCGAGCTGCCGCCGAGCTACCGCGCGGCGTTGATCGCGCGCATCAAGATCATGTGCGACCTCGACATCGCCGAGCGCCGCAAGCCGCAGGACGGCAAGATCGCCTTCGGCCGCTTCGTGCAGGGGCAGAAGCTCGAGCTGCGCGTGGCCACCATCCCGACCAACAACAGCTGCGAGGACGCGGTGCTGCGGCTGCTGGCCTCGGCCAAGCCGCTGCCGCTGGCGCAGCTGGGCCTGTCGCCGCACAACCTCGAGCGCATGCAGTTCGCCAGCCAGCGCCCCTACGGCATGATCCTGTGCGTGGGGCCCACCGGCTCGGGCAAGACGACGACGCTGCACTCGGCGATGGGCTACATCAACACGCCGCAGCGCAAGATCTGGACCGCCGAGGATCCGATCGAGATCACCCAGGCCGGGTTGCGCCAGGTGCAGGTGAACGCGAAGATCGACTGGACCTTCGCCAAGGCGCTGCGCGCCTTCCTGCGCGCCGATCCGGACGTCATCATGGTCGGCGAGATCCGCGACAAGGAGACCGCGGGCATCGCCATCGAGGCCTCCCTGACCGGCCACCTGGTGATGAGCACGCTGCACACCAACAGCGCCGCGGAGACGGTGACGCGCCTGCTGGACATGGGCATGGACCCGTTCAACTTCGCCGACGCGCTGCTCGTCGTGCTCGCGCAGCGCCTGGTGCGCCGCCTCTGCCCGAGCTGCCGCACGTCGCGCGACGCCCGGCCCGAGGAGATCGAGGAACTGCTCGGCGACTACATGCTCGCGTTCCGCGGTGCCCAGGACATGCCCGGCGCGGACGCGGTGCTCGCCGCGTGGCACGAGCGCTTTGCGCGCGAGGGCCGGCTGCAGGCGTTCGAGGCGCCGGGCTGCCCGAGCTGCGAGCACAGCGGCCTGCGCGGGCGCGCCGGCGTGCACGAACTGATGCACATGACGCCGCCGCTGCGCAAGCTCATCCAGACTGGCGGCCGCGCCGAGGAGATCCAGCACCAGGCGCTGGCGACGGGCATGCGCACGCTGCGCCAGGACGGCATCGAGAAGGTGCTGGCCGGCGTCACCTCGATCGCCGAGGTGCGCGCCACGACCAACGCCTGA
PROTEIN sequence
Length: 850
MSDMSVPPLTLASMEPPPARASAAAAPGAAAAPARFAWPTPSLPCYPAPTPPLAPEACVIEGTNGSTMAGRLMHFSLEAGMAHVQVAASRTTMPLRFSQFRVLRLAKPLNPLPFDPTDTTPLALTECKAQPYRLTLQDGTQLEGHTITHEENAHGLFLFEPANEDGAVRRCFVPRMAYRHVDIGLRLGEALIEQQAATAAQVSAALCEQDRLRQQKLGEILLVRQLITPQDLETAIEEQARMPMVRIGQALIALEMITEAQLEQALQQQQVDRGVPLGELLVKSGVIKPQDLQTALARKMGYPMVDPEQFPVEIEALQKLPYGLASRLVALPLMLRGGRLVVALEDPTRRKLLDELEFASGCKAIPVLARANTLFSAIERNYERIGAETRASATNEVGALDFQPEEAGKLLATLEQEHSAADAPDAGEDNPIEQSDNSLVRLINSMILDAQAQGVSDIHIECAPGREKVKVRFRKDGAMRPYLELPPSYRAALIARIKIMCDLDIAERRKPQDGKIAFGRFVQGQKLELRVATIPTNNSCEDAVLRLLASAKPLPLAQLGLSPHNLERMQFASQRPYGMILCVGPTGSGKTTTLHSAMGYINTPQRKIWTAEDPIEITQAGLRQVQVNAKIDWTFAKALRAFLRADPDVIMVGEIRDKETAGIAIEASLTGHLVMSTLHTNSAAETVTRLLDMGMDPFNFADALLVVLAQRLVRRLCPSCRTSRDARPEEIEELLGDYMLAFRGAQDMPGADAVLAAWHERFAREGRLQAFEAPGCPSCEHSGLRGRAGVHELMHMTPPLRKLIQTGGRAEEIQHQALATGMRTLRQDGIEKVLAGVTSIAEVRATTNA*