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AMDSBAU_19_15
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clost UNIPROT
DB: UniProtKB
27.4 186.0 90 3.30e-15 R7F5N9_9CLOT
RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
34.4 183.0 86 7.20e-15 ere:EUBREC_1449
RNA polymerase, sigma 30 subunit, SigH n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJG7_9FIRM similarity UNIREF
DB: UNIREF90
30.6
null
79 9.90e-13 ere:EUBREC_1449
(db=HMMPfam db_id=PF04542 from=23 to=84 evalue=1.8e-10 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 ere:EUBREC_1449
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=4 to=87 evalue=4.4e-12 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily
0.0 0.0 0 4.00e+00 ere:EUBREC_1449
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=13 to=186 evalue=7.7e-10 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 7.00e+00 ere:EUBREC_1449
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=2 to=87 evalue=7.2e-06) iprscan interpro
DB: Gene3D
0.0 0.0 0 7.00e+00 ere:EUBREC_1449