Alias: SULFO_OTHER_19
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBAU_19_1
unknown
|
Not on your lists |
2..223
----------------- DNA (222bp) protein (74aa) |
2..223 + ( gc_cont=0.577)
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AMDSBAU_19_2
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(302..952)
----------------- DNA (651bp) protein (217aa) |
plasmid stability protein
Plasmid stability protein n=2 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5E3G6_BACMQ
no description (db=HMMSmart db_id=SM00470 from=125 to=214 evalue=0.00022 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=124 to=207 evalue=4.7e-10 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
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AMDSBAU_19_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(1040..2056)
----------------- DNA (1017bp) protein (339aa) |
Tyrosine recombinase XerC n=1 Tax=Desmospora sp. 8437 RepID=F5SHN0_9BACL
site-specific recombinase XerD
no description (db=Gene3D db_id=G3DSA:1.10.150.130 from=6 to=109 evalue=1.1e-06 interpro_id=IPR023109 interpro_description=Integrase/recombinase, N-terminal)
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=137 to=322 evalue=1.7e-28 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
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AMDSBAU_19_4
unknown
|
Not on your lists |
2223..2951
----------------- DNA (729bp) protein (243aa) |
seg (db=Seg db_id=seg from=132 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=163)
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AMDSBAU_19_5
unknown
|
Not on your lists |
2948..3655
----------------- DNA (708bp) protein (236aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
|
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AMDSBAU_19_6
unknown
|
Not on your lists |
3807..3971
----------------- DNA (165bp) protein (55aa) |
3807..3971 + ( gc_cont=0.600)
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AMDSBAU_19_7
unknown
|
Not on your lists |
4023..4247
----------------- DNA (225bp) protein (75aa) |
seg (db=Seg db_id=seg from=4 to=21)
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AMDSBAU_19_8
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
4244..4606
----------------- DNA (363bp) protein (121aa) |
hypothetical protein
Uncharacterized protein n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CV16_BACTU (db=UNIREF evalue=2.1e-25 bit_score=120.9 identity=49.1 coverage=91.73553719008265)
(db=HMMPfam db_id=PF04266 from=6 to=67 evalue=1.4e-06 interpro_id=IPR007374 interpro_description=ASCH domain)
PUA domain-like (db=superfamily db_id=SSF88697 from=1 to=116 evalue=4.0e-21 interpro_id=IPR015947 interpro_description=PUA-like domain)
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AMDSBAU_19_9
unknown
|
Not on your lists |
4652..5092
----------------- DNA (441bp) protein (147aa) |
4652..5092 + ( gc_cont=0.503)
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AMDSBAU_19_10
unknown
|
Not on your lists |
5089..5610
----------------- DNA (522bp) protein (174aa) |
5089..5610 + ( gc_cont=0.556)
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AMDSBAU_19_11
unknown
|
Not on your lists |
comp(5620..5955)
----------------- DNA (336bp) protein (112aa) |
seg (db=Seg db_id=seg from=6 to=15)
|
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| AMDSBAU_19_12 |
Not on your lists |
comp(5972..7606)
----------------- DNA (1635bp) protein (545aa) |
DNA methylase N-4/N-6 n=1 Tax=mine drainage metagenome RepID=E6QMU1_9ZZZZ
DNA methylase N-4/N-6 n=1 Tax=mine drainage metagenome RepID=E6QMU1_9ZZZZ (db=UNIREF evalue=2.5e-171 bit_score=607.8 identity=54.3 coverage=97.06422018348624)
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain-containing protein
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AMDSBAU_19_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
7811..10438
----------------- DNA (2628bp) protein (876aa) |
DNA topoisomerase I
DNA topoisomerase I n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SIB4_THEM7 (db=UNIREF evalue=5.0e-60 bit_score=238.8 identity=28.3 coverage=85.15981735159818)
coiled-coil (db=Coil db_id=coil from=301 to=336 evalue=NA)
coiled-coil (db=Coil db_id=coil from=423 to=444 evalue=NA)
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AMDSBAU_19_14
unknown
|
Not on your lists |
10638..11237
----------------- DNA (600bp) protein (200aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
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AMDSBAU_19_15
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(11305..11877)
----------------- DNA (573bp) protein (191aa) |
RNA polymerase factor sigma-70
RNA polymerase, sigma 30 subunit, SigH n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJG7_9FIRM
(db=HMMPfam db_id=PF04542 from=23 to=84 evalue=1.8e-10 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=4 to=87 evalue=4.4e-12 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor
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AMDSBAU_19_16
unknown
|
Not on your lists |
comp(11936..12184)
----------------- DNA (249bp) protein (83aa) |
11936..12184 - ( gc_cont=0.558)
|
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AMDSBAU_19_17
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12184..12993)
----------------- DNA (810bp) protein (270aa) |
AAA ATPase central domain-containing protein
AAA ATPase central domain protein n=2 Tax=Caldicellulosiruptor RepID=E4QBK1_CALH1 (db=UNIREF evalue=2.6e-20 bit_score=105.1 identity=30.5 coverage=94.07407407407408)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=77 to=239 evalue=1.5e-21)
(db=HMMPfam db_id=PF01695 from=76 to=226 evalue=4.4e-19 interpro_id=IPR002611 interpro_description=IstB-like ATP-binding protein GO=Molecular Function: ATP binding (GO:0005524))
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AMDSBAU_19_18
unknown
|
Not on your lists |
comp(12947..13465)
----------------- DNA (519bp) protein (173aa) |
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=109 evalue=0.00037 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=65 evalue=1.1e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
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AMDSBAU_19_19
unknown
|
Not on your lists |
comp(13495..14391)
----------------- DNA (897bp) protein (299aa) |
13495..14391 - ( gc_cont=0.526)
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AMDSBAU_19_20
unknown
|
Not on your lists |
comp(14527..14811)
----------------- DNA (285bp) protein (95aa) |
seg (db=Seg db_id=seg from=58 to=73)
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AMDSBAU_19_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14863..15294)
----------------- DNA (432bp) protein (144aa) |
hypothetical protein
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U002_SULAD
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AMDSBAU_19_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15408..16112)
----------------- DNA (705bp) protein (235aa) |
appr-1-p processing domain-containing protein
Appr-1-p processing domain-containing protein n=1 Tax=Corallococcus coralloides DSM 2259 RepID=H8MJ32_CORCM (db=UNIREF evalue=2.1e-29 bit_score=135.2 identity=47.6 coverage=67.65957446808511)
no description (db=HMMSmart db_id=SM00506 from=59 to=205 evalue=0.00014 interpro_id=IPR002589 interpro_description=Appr-1-p processing)
no description (db=Gene3D db_id=G3DSA:3.40.220.10 from=35 to=209 evalue=1.2e-08)
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AMDSBAU_19_23
unknown
|
Not on your lists |
comp(16112..16615)
----------------- DNA (504bp) protein (168aa) |
seg (db=Seg db_id=seg from=116 to=134)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
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AMDSBAU_19_24
unknown
|
Not on your lists |
comp(16666..16809)
----------------- DNA (144bp) protein (48aa) |
seg (db=Seg db_id=seg from=9 to=22)
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AMDSBAU_19_25
unknown
|
Not on your lists |
comp(16860..17237)
----------------- DNA (378bp) protein (126aa) |
seg (db=Seg db_id=seg from=97 to=111)
seg (db=Seg db_id=seg from=58 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
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AMDSBAU_19_26
unknown
|
Not on your lists |
comp(17303..17818)
----------------- DNA (516bp) protein (172aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
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AMDSBAU_19_27
unknown
|
Not on your lists |
comp(17882..18304)
----------------- DNA (423bp) protein (141aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
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AMDSBAU_19_28
unknown
|
Not on your lists |
comp(18258..18713)
----------------- DNA (456bp) protein (152aa) |
seg (db=Seg db_id=seg from=125 to=135)
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AMDSBAU_19_29
unknown
|
Not on your lists |
comp(19061..19357)
----------------- DNA (297bp) protein (99aa) |
19061..19357 - ( gc_cont=0.488)
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AMDSBAU_19_30
unknown
|
Not on your lists |
comp(19357..19581)
----------------- DNA (225bp) protein (75aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
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