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AMDSBAU_42_16

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: comp(13549..14370)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 238.0
  • Bit_score: 243
  • Evalue 5.10e-62
RNA polymerase sigma factor n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GGH2_9FIRM (db=UNIREF evalue=6.3e-62 bit_score=243.4 identity=56.3 coverage=81.02189781021897) similarity UNIREF
DB: UNIREF
  • Identity: 56.0
  • Coverage: 81.0
  • Bit_score: 243
  • Evalue 6.00e+00
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66) iprscan interpro
DB: TMHMM
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

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Taxonomy

Desulfitobacterium metallireducens → Desulfitobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 822
ATGCATGGCTCGTTTGCTCACGACTCTCGCGGGGAATTTTTGTGTGGCCATGCACAGCTCGGGTCAACGATTCATAAGATCGTCAAGCAGGACTTTCGCGCAAAAATGACGGATCGGGAGGATGGACCGATGGGCATCGGTTTAATGGTCTTGATAGCCGTGGCGGCTGCACAAGGTGCCATTTGGCTTGCCGGGTATATTGGCGGTAATGCTTTTCCACAACCTCTAAGCGAAGTGGAAGAGAAGGAAGCCTTGGAAGCCATGCAAGGGGGCGACAAAGAAGCGCGTCAGCGACTGATAGAACATAATCTGCGGCTTGTGGCACATGTGGTCAAAAAATACGCTAATAAAGGAACCGAATCAGACGACTTGATAAGCATTGGAGCCATTGGACTGATAAAAGGCGTTGATACCTTTAATCAGAAGAAAGGTACGAGATTGGCAACATACTGTGCTCGGTGTATCGAAAATGAGGTATTGATGCACCTACGAAATCAAAAGAAGCTCAAAAGTGAAGTGAGCATTTATAGTCCCATTGGTGTTGATCGAGAGGGCAACGAAATTCTGTTACTAGACGTCTTGGCCAGCGGAGACGAGGTTCCCGACACGGTGGAGGTCAACATGATTATGGCCTGGGTGACCGACTTTGTGACCAGTCTGACGTGGAAGGAGCGCTTGGTACTGAATTTACGTTTTGCGTTGAATGGCCGCTACACGCAAAAAGAAATTGCCGAGCGATTGGGCATCTCTCGCAGCTATGTGTCCCGCATCGAAAAGAAGGCCGTCGAAAAGATTTTGGCGGCTCTGAGCCTTCCAACGTGA
PROTEIN sequence
Length: 274
MHGSFAHDSRGEFLCGHAQLGSTIHKIVKQDFRAKMTDREDGPMGIGLMVLIAVAAAQGAIWLAGYIGGNAFPQPLSEVEEKEALEAMQGGDKEARQRLIEHNLRLVAHVVKKYANKGTESDDLISIGAIGLIKGVDTFNQKKGTRLATYCARCIENEVLMHLRNQKKLKSEVSIYSPIGVDREGNEILLLDVLASGDEVPDTVEVNMIMAWVTDFVTSLTWKERLVLNLRFALNGRYTQKEIAERLGISRSYVSRIEKKAVEKILAALSLPT*