ggKbase home page

RBG2_212_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Marine sediment metagenome DNA, contig: S06H3_S23454 {ECO:0000313|EMBL:GAI56197.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen UNIPROT
DB: UniProtKB
84.3 83.0 146 1.30e-32 X1PIS9_9ZZZZ
50S ribosomal protein L27 similarity KEGG
DB: KEGG
72.0 82.0 121 1.50e-25 gsb:GSUB_02025
50S ribosomal protein L27 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RL27_THERP (db=UNIREF evalue=1.7e-24 bit_score=117.1 identity=68.3 coverage=96.4285714285714) similarity UNIREF
DB: UNIREF
68.0 96.0 117 1.00e+00 gsb:GSUB_02025
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 gsb:GSUB_02025
RL27_PROMA_Q7VAN2; (db=BlastProDom db_id=PD003114 from=28 to=74 evalue=1.0e-11 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: BlastProDom
0.0 0.0 0 1.00e+00 gsb:GSUB_02025
(db=HMMPfam db_id=PF01016 from=2 to=81 evalue=1.7e-35 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 gsb:GSUB_02025
Ribosomal L27 protein (db=superfamily db_id=SSF110324 from=20 to=83 evalue=3.0e-21 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 gsb:GSUB_02025
RIBOSOMAL PROTEIN L27 (db=HMMPanther db_id=PTHR15893 from=8 to=82 evalue=3.0e-35 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPanther
0.0 0.0 0 3.00e+00 gsb:GSUB_02025
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=29 to=53 evalue=7.6e-37 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 7.00e+00 gsb:GSUB_02025
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=4 to=28 evalue=7.6e-37 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 7.00e+00 gsb:GSUB_02025
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=54 to=78 evalue=7.6e-37 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 7.00e+00 gsb:GSUB_02025
L27: ribosomal protein L27 (db=HMMTigr db_id=TIGR00062 from=1 to=82 evalue=7.9e-43 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 7.00e+00 gsb:GSUB_02025
Ribosomal_L27 (db=HAMAP db_id=MF_00539 from=1 to=82 evalue=25.269 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HAMAP
0.0 0.0 0 2.50e+01 gsb:GSUB_02025
  • SCG Annotations
  • BSCG ribosomal protein L27