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RBG2_212

Alias: scaffold_214

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Displaying 2 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_212_1
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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225..554
DNA (330bp) protein (110aa)
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_13_Chloroflexi_56_8b_curated
50S ribosomal protein L21
50S ribosomal protein L21 n=5 Tax=Dehalococcoides RepID=RL21_DEHE1 (db=UNIREF evalue=2.6e-25 bit_score=120.2 identity=51.8 coverage=98.1818181818182)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=7 to=107 evalue=1.6e-40 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RBG2_212_2

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566..817
DNA (252bp) protein (84aa)
Marine sediment metagenome DNA, contig: S06H3_S23454 {ECO:0000313|EMBL:GAI56197.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L27
50S ribosomal protein L27 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RL27_THERP (db=UNIREF evalue=1.7e-24 bit_score=117.1 identity=68.3 coverage=96.4285714285714)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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